| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0537 |
|---|
| Symbol | |
|---|
| ID | 5082805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 539168 |
|---|
| End bp | 540046 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640482092 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit III |
|---|
| Protein accession | YP_001166748 |
|---|
| Protein GI | 146276589 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.931468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGA AACCGACGAA ACAGAAGCCG GGCGAGCCGC CGACCACGGG CCATTCCTGG
GATGGCATCG AGGAATATGA CAATCCGATG CCGCGCTGGT GGCTGTGGAC CTTCTATGTC
ACCATCATCT GGGCGATCGG CTATTCGATC CTCTACCCGG CCTGGCCGCT GGTGAACGAC
GCCACCAAGG GGCTTCTCGG CCAATCGACG CGGGCCGATG TGGCCGCCGA GATCCAGGCC
TACGCCGACG CCAATGCCGA GATCCGCACG CGGCTCGTCG AGACGGAGCT GACCGAGATC
GCGACCAACC CGGATCTGGT CCAGTACGCG ACCAACGCCG GTGCGGCCGT GTTCCGCACC
AACTGCGTGC AGTGCCACGG CTCGGGGGCG GCGGGCGTGC AGGGGCAGGG CTATCCCAAC
CTGCTCGACG ACGACTGGAT CTGGGGCGGC GACATCGAGT CGATCCACAC CACCGTCACG
CACGGCATCC GCAACACGAC CGACGACAAC GCGCGCTATT CCGAGATGCC GCGTTTCGGC
GCCGACGGTC TGCTGGATGA CACCCAGCTT TCGCAGGTGG TCGAATATGT CCTGCAGATC
TCGGGGCAGG AGCATGACGC CGCTCTCGCC ACCGAAGGCG CGACGGTCTT CCTCGACAAC
TGCGCCGCCT GCCACGGCGA CGATGGCACC GGCAGCCGCG ACGTGGGCGC CCCGAACCTG
ACGGACGCGA TCTGGCTCTA TGGCGGAAGC CGCGAGACGA TCACCGAGTC GGTGACCTAT
GCGCGCTTCG GCGTGATGCC CAACTGGAAC AACCGCCTGT CCGAAGCGGA CATCCGGTCG
GTGGCCATCT ATGTCCACGG CCTCGGGGGC GGCGAGTAA
|
|---|
| Protein sequence | MSVKPTKQKP GEPPTTGHSW DGIEEYDNPM PRWWLWTFYV TIIWAIGYSI LYPAWPLVND
ATKGLLGQST RADVAAEIQA YADANAEIRT RLVETELTEI ATNPDLVQYA TNAGAAVFRT
NCVQCHGSGA AGVQGQGYPN LLDDDWIWGG DIESIHTTVT HGIRNTTDDN ARYSEMPRFG
ADGLLDDTQL SQVVEYVLQI SGQEHDAALA TEGATVFLDN CAACHGDDGT GSRDVGAPNL
TDAIWLYGGS RETITESVTY ARFGVMPNWN NRLSEADIRS VAIYVHGLGG GE
|
|---|
| |