| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0503 |
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| Symbol | |
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| ID | 5082862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 500740 |
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| End bp | 502827 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640482057 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001166714 |
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| Protein GI | 146276555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0629426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.16655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC GCCTCAACCT GCGCGTGCGG ATCCTGCTCT TCTTCGCTGC GCTGGCAGTG
GGGGCGAATG TGGCGGTGTC GATCGGCCTG TTCCTCGCCT ATCGGCGCCT CAGCGCCCCC
GAGCTGCTGC CTGCCTTCCA GCAGGTCGGC CTTGTGGCCG GGCTTGCGAT CCTGGGCCTC
GTCACCTGGA TCTGGTATCT GTTCGATGCC AATGTGGCGC TGCCGATCAT CCGGCTCGCC
TCGAAGCTGC GGGCACGGGC CCATGCCGCC GTCGATGGCG CGATCGAAGA GCCGACGGCC
CGCTACCTCG GCGATCTCGA GCCCGCGGCT TCGGCCACGG CCCTGACGCT GGCCGAGACG
CGGAACGCCC TGGCCGAGTC CGTCGCGCGC GAGACGTCGC GCCTATCGTC CGAGAAGGCC
CGGCTCGAGG CGCTGCTGTC CGATGTGCCG GTGGGGGTGC TGCTCTGTTC GGGCGACCAC
CAGCTCGTGT TCTATAACGG ACCGGCGACC GACCTGATGA ACACGGCCGG CGCGCCGGGC
CTCGACCGCA ATCTCTTCGA CTATCTGCGC GACGGGCCGA TCCGCCACGC CCACCAGCGG
CTCGTCGAGG CGGGCGACCC GGATGCGGCC TCGGACATCC TCTGCACGAC GGTAGTCGGG
GCGCGGGTGC TGGCCGCCCG GATGCGGCTG ATCGGGGGCG AGACCACGAA GCCCGGCTAT
GTTCTCACGC TGCGCGACGT CACCTCGGCG CTTGCGTCCT ACGCGCGTCG CGAGGCGCTG
CTGGCCGAGG TGTTCGACCG GGTGCGGCGG CCGGCGGCCA ACCTCCAGAC GCTGTTCGAG
GTGCTTCCGC CCGGCACCTG CCCGCCGCCG GATGTCGAGC GGGCGCTGCG GCAGGAAGTC
GGCGGTCTCG CCGCCGCGAT CACCGACCTC GGCGCCCGGC ACGACGAGAG CCGGCACGAC
GGCTGGCCGC TGTCGATCAC GCGCGCCTCG GATCTGCTCG ACGGGCTGAG GGCGCGGATG
GAACAGGCGG GCCTTTCGGC CGAGATCGGC GAAGCGCCGC TTCTTTTGCG CTGCAACGGG
TTCGAGGTGA TCGGTCTGGT GGCGACCCTG GCCGCCCGCG TCGCGGCCCG CCGCACCGGC
AACCACTTCC GCGTGACCCT GACCGAGGAC GGAACCGAGG CCATGCTGCG GCTGGTCTGG
CAGGGCGCTC CGCTGCCCGT CGGCCTGCTC GAGGACTGGC TGGGCGAGCC GCTCGAACCG
GGTGTGCCCG AGGTGACGGG CCGCACCGTG CTTTCCACCC ACACGACCGA GATCTGGCCC
GAACCTGCGG CTCCGGGAGA GAATGCGCTC TGCCTGCCCT TGCGCGCCGC CCGCCGTGCC
GGCCGCCGCC CGCGTCCGAT CCCGCGCGCC GTGGTCTATG ATTTCGAGCT GCTCTCGAAG
GCCCGCAACG AGAAGGTGGC CGAGGCGCGG CTCGAGGATC TGACCTATGT GGTCTTCGAC
ACCGAGACCA CCGGCCTCAT GCCCTCGCAG GATGAGATCG TGCAGATCGC CGCCGTCCGC
ATCGTGAACG GCCGCCGCGT CGAGGCCGAG GTGTTCGACA CGCTGGTCAA TCCGCGCCGG
CCGATTCCGC CTTCGTCCAC CGAGGTCCAC GGGATCACGG ATGCGATGGT GGCCGACGCG
CCGGACATGA CCGAGGTCGG GCGGCAGTTC CACAAGTTCG CCGAAGGGGC GGTGCTCGTC
GCCCACAATG CGCCCTTCGA CATGGAGTTC CTCCGCCGGG CCGAGCTGCT GATCGACCGC
CGCTTCGACA ATCCGATCCT CGACACGGTG CTCCTGTCGG CGGTTCTCTT CGGGCAGACC
GAGGTGCACA GCCTCGATGC GCTGGCGCAC CGGCTGGGGA TCACCATCCC GGAAGAGGCG
CGCCACACGG CCATCGGCGA CACGGTCGCG ACGGCCGACG CCTTCCTGAA GCTGCTGCCG
ATGCTGCAGG GCCGGGGCTT CGAGACCTTC GGCGCCGTGC TCTCCGAGGT GCGCCGCCAC
GGACGGCTGC TCAAGGATCT GAACGAGGCC AATCTGACCG ACGCCTGA
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| Protein sequence | MLDRLNLRVR ILLFFAALAV GANVAVSIGL FLAYRRLSAP ELLPAFQQVG LVAGLAILGL
VTWIWYLFDA NVALPIIRLA SKLRARAHAA VDGAIEEPTA RYLGDLEPAA SATALTLAET
RNALAESVAR ETSRLSSEKA RLEALLSDVP VGVLLCSGDH QLVFYNGPAT DLMNTAGAPG
LDRNLFDYLR DGPIRHAHQR LVEAGDPDAA SDILCTTVVG ARVLAARMRL IGGETTKPGY
VLTLRDVTSA LASYARREAL LAEVFDRVRR PAANLQTLFE VLPPGTCPPP DVERALRQEV
GGLAAAITDL GARHDESRHD GWPLSITRAS DLLDGLRARM EQAGLSAEIG EAPLLLRCNG
FEVIGLVATL AARVAARRTG NHFRVTLTED GTEAMLRLVW QGAPLPVGLL EDWLGEPLEP
GVPEVTGRTV LSTHTTEIWP EPAAPGENAL CLPLRAARRA GRRPRPIPRA VVYDFELLSK
ARNEKVAEAR LEDLTYVVFD TETTGLMPSQ DEIVQIAAVR IVNGRRVEAE VFDTLVNPRR
PIPPSSTEVH GITDAMVADA PDMTEVGRQF HKFAEGAVLV AHNAPFDMEF LRRAELLIDR
RFDNPILDTV LLSAVLFGQT EVHSLDALAH RLGITIPEEA RHTAIGDTVA TADAFLKLLP
MLQGRGFETF GAVLSEVRRH GRLLKDLNEA NLTDA
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