Gene Rsph17025_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0466 
Symbol 
ID5082265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp461542 
End bp462585 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content66% 
IMG OID640482019 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001166677 
Protein GI146276518 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.21086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGGTCCAAAC GCCTCAGGTC TTCCCCACCC GGGTCTTCTC CGGCATCCAG 
CCCTCGGGCG GGCTGACGCT GGGCAACTAT CTCGGCGCGC TGAAGCGGTT CGCCGACATG
CAGAAGGACG GGGTCGAGAC CATCTACTGC GTCGTCGACA TGCACGCCAT CACCGTCTGG
CAGGATCCCG CCAAGCTGCG CCAGCAGACC CGCGAGATCG CCGCGGCCTT CATCGCCGCA
GGCGTCGATC CGGTGCGCTC GATCCTCTTC AACCAGAGCC AGGTGACGGC CCATGCCGAG
CTGGCCTGGA TCTTCAACTG CGTGGCCCGC ATGGGCTGGA TGAACCGCAT GACGCAGTGG
AAGGACAAGG CGGGCAAGAA CGCCGAAGCG GCCTCGCTCG GCCTCTTTGC CTATCCCGCG
CTGATGGCGG CGGACATCCT CGCCTATCGC GCGACCCATG TGCCGGTGGG CGAGGACCAG
AAGCAGCATG TGGAGCTGAC CCGCGACATC GCGATCAAGT TCAACAACGA CTTCGGCGTG
AACTTCTTCC CGGTGACGGA GCCCGTGATC GAGGGTGTGG CGACCCGCGT CATGAGCCTG
CGGGACGGCA CCAGGAAGAT GTCGAAATCC GATCCCTCGG ACCAGAGCCG GATCAACATG
ACGGACGATG CCGACACGAT CACGCAGAAG ATCCGCAAGG CCAAGACCGA TCCCGAGCCG
CTTCCCGACA CGATCGACGG GCTGAAGGAC CGTCCCGAGG CGCGCAACCT CGTGAACATC
TACGCCGCGC TCTCCCAATC CACGCCCGAG GCGGTCGTGG CCGAGTTCGC GGGCGCGCAG
TTCGGCACCT TCAAGCCGAA GCTGGCCGAG CTGGCCGTCT CGGTGATGGC GCCGATCTCG
TCCGAAATGA ACCGGCTGAT GGCCGATCCC GCCGAGATCG ACCGCATCCT CGGCGCGGGC
GCCGACCGGG CCGACGCGCT GGCGCGGCCG ATCCTAGAGC AGGTCTATGA CATCGTCGGG
ATGATCCGCT CGCGGCGGGT GTGA
 
Protein sequence
MTEPVQTPQV FPTRVFSGIQ PSGGLTLGNY LGALKRFADM QKDGVETIYC VVDMHAITVW 
QDPAKLRQQT REIAAAFIAA GVDPVRSILF NQSQVTAHAE LAWIFNCVAR MGWMNRMTQW
KDKAGKNAEA ASLGLFAYPA LMAADILAYR ATHVPVGEDQ KQHVELTRDI AIKFNNDFGV
NFFPVTEPVI EGVATRVMSL RDGTRKMSKS DPSDQSRINM TDDADTITQK IRKAKTDPEP
LPDTIDGLKD RPEARNLVNI YAALSQSTPE AVVAEFAGAQ FGTFKPKLAE LAVSVMAPIS
SEMNRLMADP AEIDRILGAG ADRADALARP ILEQVYDIVG MIRSRRV