Gene Rsph17025_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0455 
Symbol 
ID5082254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp451252 
End bp451581 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID640482008 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001166666 
Protein GI146276507 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0666222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0413698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTGA CCCCCGCCTT CGCTCAGGCC GCCGCTCCGG GTGGTGCTGC CGGCGCTTTC 
ACCAGTTTCG TGCCGCTCAT CCTGATCTTC GTGATCATGT ATTTCCTTCT GATCCGTCCT
CAGCAGAAGA AACTGAAGGA ACACAAGGCG ATGGTCGAGG CGTTGCGCCG CGGTGACCAG
GTTCTCACCG GCGGCGGCAT CGTCGGCAAG GTGGTGAAGG TCCATGAGGA CGGCATCATC
GACGTCGAGA TTGCCGAGGG CGTGAAGGTC CGCGTGATGA AGTCCACCAT CGTGCAGGTC
ATGTCCAAGA CCGAACCTGC CGCCGCCTGA
 
Protein sequence
MFVTPAFAQA AAPGGAAGAF TSFVPLILIF VIMYFLLIRP QQKKLKEHKA MVEALRRGDQ 
VLTGGGIVGK VVKVHEDGII DVEIAEGVKV RVMKSTIVQV MSKTEPAAA