| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0290 |
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| Symbol | |
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| ID | 5084148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 286749 |
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| End bp | 287702 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640481845 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001166505 |
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| Protein GI | 146276346 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0541635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCC GCACAACCCT GTCCGCGGCC CTGGCCGCTG CCGCGCTGAG CCTGCAGCCG
CAAGCGGCCG CCGCGCAGGA GTTCATCAAC GTCCTGACCG GGGGCACCTC GGGCGTCTAT
TACCCGCTCG GTGTCGGCCT GTCCGAAATC TATGCCGAGA ACATCGAGGG CTCCCGCACG
CAGGTGCAGG CCACGAAGGC CTCGGTCGAG AACCTCAACC TGCTCGCGCA GCGCAAGGGC
GAGCTGGCCT TCGCGCTGGG CGATTCCGTC ACGATGGCCT GGGAGGGCAA CGAGGAAGCC
GGCTTCCCGC GCCCGCTGAC CAACCTGCGC GCCATTGCCG CGATCTATCC GAACTACATC
CAGATCGTGG CCGACGCCTC GGCGGGGGCG GCCACGCTCG AGGATCTCAA GGGCAAGACG
CTCTCGGTGG GCGCTCCGGC GTCGGGGACA GAGCTCAACG CGCGTGCGAT CTTCGGCGCG
GCCGAGATGA GCTACGACGA TCTCGGCAAG GTCGAATATC TGCCCTACGC GGAATCCGCC
GAACTGATCA AGAACCGGCA GTTGCAGGCG ACGCTGCAAT CCTCGGGGCT GGGCGTGGCC
TTCATCAAGG ACCTCTCGGC CACCCACGAC ATCACCCTCG TGGGCATCCC CTCGGAGGTG
GTCGAGAAGA TCGGTGCGCC CTATGTGCCC GCCGTCATCC CGGCCGGCAC CTACAGCGGC
CAGGATCAGG ACGTGCCGAC AGCGGCCGTG GGCAACCTGC TGGTCACGCA TGAGGACGTG
AGCGAGGAAA CCGCCTACCA GATGACGAAG CTCATGTTCG ACAACATCGA GCGGCTGAAG
TCGGCCCACG CCGCCGCGGC GAACATCAAG CCCGAGACGG CCATCGAGGC GCTGCCGATC
CCGCTTCATC CGGGCGCCGA GAAGTACTAC CGCGAAATCG GCCTGATCCA GTAA
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| Protein sequence | MFRRTTLSAA LAAAALSLQP QAAAAQEFIN VLTGGTSGVY YPLGVGLSEI YAENIEGSRT
QVQATKASVE NLNLLAQRKG ELAFALGDSV TMAWEGNEEA GFPRPLTNLR AIAAIYPNYI
QIVADASAGA ATLEDLKGKT LSVGAPASGT ELNARAIFGA AEMSYDDLGK VEYLPYAESA
ELIKNRQLQA TLQSSGLGVA FIKDLSATHD ITLVGIPSEV VEKIGAPYVP AVIPAGTYSG
QDQDVPTAAV GNLLVTHEDV SEETAYQMTK LMFDNIERLK SAHAAAANIK PETAIEALPI
PLHPGAEKYY REIGLIQ
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