Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0213 |
Symbol | |
ID | 5082152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 206007 |
End bp | 207485 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481768 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_001166428 |
Protein GI | 146276269 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.786998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.906241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACT CCGTCACCGA CCTGCGTTCG ATACTCAAGG ATCCGTCGCT GCTCGAAACC CGCGCCTTCG TGGCGGGCGA GTGGGTGGCG GCCGATGACG GTGCCAGCTT CGAGGTAACG AACCCCGCCC GCGGCGACGT GATCTGCACC ATCCCGGACC TCGGCCGGGC CGAGACCGCG CGTGCCATCG CCGCCGCGGC CGAGGCGATG AAGGACTGGG CCGCCCGCAC CGGCAAGGAA CGCGCGCAGG TGATGCGCAA GTGGTTCGAC CTGATGATGG CCAACCAGGA CGACCTCGGC GCGATCCTGA CGGCCGAGAT GGGCAAGCCC CTCGCCGAGG CCAAGGGCGA GATCGCCTAT GGCGCCTCCT TCATCGAATG GTTCGGCGAA GAGGCCAAGC GCGTCTATGG CGAGACCATC CCCGGCCACA TGCGCGACAA GCGCATCACC GTGCTCAAGC AGCCGATCGG CGTCGTGGGC TCGATCACGC CCTGGAACTT CCCGAACGCG ATGATCACCC GCAAATGCGG CCCGGCGCTG GCCGCGGGCT GCGGCTTCGT CGCCCGCCCC GCCGCCGAAA CCCCGCTGTC GGCGCTGGCG CTGGCGGTGC TGGGCGAGCG CGCGGGGCTG CCGAAGGGCA TCCTGTCGGT CATCACCTCG AGGAAATCCT CGGACATCGG CAAGGAGTTC TGCGAGAATC CGGCCGTCCG CAAGCTGACC TTCACGGGCT CGACCGAGGT GGGGCGCATC CTGCTCAGGC AGGCGGCGGA TCAGGTGATG AAATGCTCGA TGGAGCTGGG CGGCAACGCG CCCTTCATCG TTTTCGACGA CGCCGACCTC GACGCGGCGG TGCAGGGCGC CATGGCGTCG AAGTTCCGCA ACAACGGCCA GACCTGCGTC TGCGCGAACC GCATCTATGT GCAGGCCGGC GTCCATGACG CCTTCGCCGA GAAGCTGGCG GCGGCGGTGA AGAAGCTGCG CGTCGGCGAC GGGCTGGTGG AGGGGACCGA GGCCGGCCCG CTCATCAACG AGAAGGCGGT CGAGAAGGTC GAGGAACATA TCCGCGACGT GCTCGACGGC GGCGGCGAGG TGTTGACCGG CGGCAAGCGG CACGAGCTGG GCGGCACCTT CTTCGAGCCG ACCGTCGTGA CCGGCGTCAC GCAGGAGATG AAGGTCTCAA ACGAAGAGAC CTTCGGGCCG CTCGCGCCGC TCTTCCGGTT CGACACCGAA GAGGAGGTGA TCGGCTATGC GAACGACACG ATCTTCGGCC TTGCCTCCTA CTTCTACGCT CGCGACGTGG GCCGCATCAC CCGCGTCCAG GAGGCGCTGG AATATGGCAT CGTCGGCGTC AACACCGGCA TCATCTCGAC CGAGGTCGCA CCCTTCGGCG GGGTGAAGCA GTCCGGCCTC GGCCGCGAGG GCTCGCGGCA CGGCATCGAG GATTATCTCG AGATGAAATA CATCTGCCTC TCGATCTGA
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Protein sequence | MLDSVTDLRS ILKDPSLLET RAFVAGEWVA ADDGASFEVT NPARGDVICT IPDLGRAETA RAIAAAAEAM KDWAARTGKE RAQVMRKWFD LMMANQDDLG AILTAEMGKP LAEAKGEIAY GASFIEWFGE EAKRVYGETI PGHMRDKRIT VLKQPIGVVG SITPWNFPNA MITRKCGPAL AAGCGFVARP AAETPLSALA LAVLGERAGL PKGILSVITS RKSSDIGKEF CENPAVRKLT FTGSTEVGRI LLRQAADQVM KCSMELGGNA PFIVFDDADL DAAVQGAMAS KFRNNGQTCV CANRIYVQAG VHDAFAEKLA AAVKKLRVGD GLVEGTEAGP LINEKAVEKV EEHIRDVLDG GGEVLTGGKR HELGGTFFEP TVVTGVTQEM KVSNEETFGP LAPLFRFDTE EEVIGYANDT IFGLASYFYA RDVGRITRVQ EALEYGIVGV NTGIISTEVA PFGGVKQSGL GREGSRHGIE DYLEMKYICL SI
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