| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0200 |
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| Symbol | |
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| ID | 5082139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 188763 |
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| End bp | 191576 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481755 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001166415 |
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| Protein GI | 146276256 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.932691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCG GCAAGGGCCA CCATCTGCAT CTCATCGACG GCTCGGCCTT CATCTTCCGC
GCCTATCACG CGCTGCCTCC GCTGACGCGG AAATCCGACG GCCTGCCGGT GGGCGCCGTC
GCGGGCTTCT GCAACATGCT GTTCCGCTAT GTCGAGAACA ACAAGGGCCC CGACGCGCCG
ACCCATGTCG CGGTGATCTT CGACCATTCC TCGAAGACCT TCCGCAACGA GATCTACCCC
CTTTACAAGG CCCAACGCCC CGAGCCGCCC GAGGATCTGC GCCCGCAGTT TCCCCTGACG
CGCGAGGCGA CGCGGGCCTT CAACATCTCC TGCATCGAGA CCGAGGGCTT CGAGGCCGAC
GACATCATCG CGGCGCTCGC CTGCCGTGCG CGCGAGGCGG GCGGCACCTG CACGATCCTG
TCCTCGGACA AGGACCTGAT GCAGCTGGTG GGCGACGGGG TCGAGATGCT CGACCCGATG
AAGAACAAGC GCATCGGCCG CGACGAGGTG ATCGAGAAGT TCGGCGTCCC GCCTGAAAGG
GTGGTGGACG TGCAGGCGCT GGCGGGCGAT TCCGTGGACA ACGTGCCGGG CGCGCCGGGC
ATCGGGATCA AGACCGCGGC GCTTCTGATC CAGGAATATG GCGACCTCGA AGGCCTGCTT
GCGCGGGCGG GCGAGATCAA GCAGCCCAAG CGCCGCGCCG CCATCGAGGA CAATGCCGAG
CAGATCCGCA TCTCGAAGCG GCTGGTGGAA CTGGACTGCA ACACGCCGCT CGACTTTGCG
CTCGAGGATC TCGAGGTGCG GCTGCCGGTG GCGGACGAGC TTCTGGGCTT CCTCAACCGG
ATGGAGTTCC GCACGCTGAC GACCCGTGTG GCCGCGAGCC TGAAGGTCGA GCCGCCCCCT
GCCCCCACGG CCTTCGTGGT CCAGAACGAG AGCGTGCCCG AGATCGTCGA GCAGGTCGAG
GCGGCGCTGC CCTTCGACAG CGCCTCCTAT GCCTGCGTGC GCGACGCCGA GGCGCTGGCC
GCATGGATCG CGCGCATCCG CGAGCGGGGC CATGTCGCCA TCGACACCGA GACCACCAGC
CTCGACGAGA TGCGCGCCGA ACTGGTGGGC ATCTCGCTCT GCGTCGAGGC GGGATCGGCC
TGCTACATCC CGCTCGGCCA CCGCGCGGGC GGGGGTGATC TGTTCGGCAG CTTGGATCTC
GTGGCCGACC AGATCCCGCT CGATCTGGCG CTCTCGATGC TGAAGCCGGT GCTGGAGGAT
GACGCGATCC TCAAGATCGG CCAGAACATG AAATACGATG CCAAGATCTT CGCGCGGCAT
GGCATCCGGG TCGCGCCGAT CGACGACACG ATGCTGATGT CCTACGCGAT GCACGCCGGC
CGCCACGGCC ACGGCATGGA CGAGCTGTGC GATACCTACC TCGGCCACAA GCCCATCGCG
ATCAAGACGC TTCTGGGGTC CGGCAAGAGC CAGATCACCT TCGACCGGGT GCCGGTGGAT
CAGGCGGTCT GCTACGCCGC CGAGGATGCC GATGTCACGC TGCGGCTGTG GCGGCTGTTC
AAGCCGCAGC TGCACCGCGC GCGGGTGACG ACGGTCTACG AGACGCTGGA GCGCCCCCTT
GTCCCGGTTC TGGCCGAGAT GGAGATGGCG GGGGTGCAGG TCGACCGCGA TACGCTCTCG
CGGATGTCGA ACGCCTTCGC ACAGAAGATG GCCGCGCTCG AGGCCGAGAT CCACGGCCTC
GCCGGCGGCC CCTTCAACGT CGGCAGTCCC AAGCAACTGG GCGAGATCCT GTTCGAGCGG
ATGAGCCTTC AGGGCGGGGT CAAGGGCAAG AACGGCGCCT GGGGCACCGG CGCCGACGTG
CTGGAGGATC TGGCCGCCGA GGGCCACGAC CTGCCCGCCC GCGTGCTGGA CTGGCGACAG
CTCTCCAAGC TGAAATCCAC CTATACCGAC GCGCTGCAGG AGCATATCCA TCCCGAGACG
GGACGCGTTC ACACCTCCTA TTCCATTGCG GGAGCGAACA CCGGCCGCCT CGCCTCGACC
GATCCGAACC TGCAGAACAT CCCCGTCCGC ACCGAGGAGG GCCGCCGCAT CCGGGAGGCC
TTCGTGGCGC CGAAGGGCAA GCTTCTGGTC AGCGTCGACT ATTCCCAGAT CGAGCTGCGC
ATCCTGGCCC ATATCGCCGA CATCCCGGCG CTGAAGCAGG CCTTCCGCGA AGGGCACGAC
ATCCACGCCA TGACGGCCGC GGAGATGTTC AACGTGCCGC TGGAGGGGAT GGACCCGATG
GTGCGCCGGC AAGCCAAGGC GATCAACTTC GGGGTGATCT ACGGCATCTC GGGCTTTGGG
CTGGCGCGCA ACCTGCGCAT CCCGCGCGCC GACGCCCAGG GCTTCATCGA CCGCTATTTC
GAGCGCTTCC CCGGCATCCG CGCCTACATG GACGAGACGG TGGCCTTTGC GAAGGCCCAC
GGTTTCGTCC AGACCCTGTT CGGCCGCCGC ATCAACACGC CCGAGATCAA CGCCAAGGGC
CCCGGTGCGG GCTTTGCCCG CCGCGCGGCG ATCAACGCGC CGATCCAGGG AACCGCGGCC
GATGTGATCC GCCGCGCCAT GATCCGCATG CCGAAGGCGC TCGACGGGCT GCCGGCGAAG
ATGCTGCTGC AGGTCCATGA CGAACTGCTG TTCGAGGTGG ACGAGGCGGC GGCGGACCCG
GTGATCGCGC GGGTCCGCGA GGTGATGGAA AGCGCCTCCG AGCCGGCGGT GAAACTGTCG
GTGCCGCTGA CGGTGGATGC GGGCCGCGGC GCCAACTGGG CCGAGGCCCA CTGA
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| Protein sequence | MTFGKGHHLH LIDGSAFIFR AYHALPPLTR KSDGLPVGAV AGFCNMLFRY VENNKGPDAP
THVAVIFDHS SKTFRNEIYP LYKAQRPEPP EDLRPQFPLT REATRAFNIS CIETEGFEAD
DIIAALACRA REAGGTCTIL SSDKDLMQLV GDGVEMLDPM KNKRIGRDEV IEKFGVPPER
VVDVQALAGD SVDNVPGAPG IGIKTAALLI QEYGDLEGLL ARAGEIKQPK RRAAIEDNAE
QIRISKRLVE LDCNTPLDFA LEDLEVRLPV ADELLGFLNR MEFRTLTTRV AASLKVEPPP
APTAFVVQNE SVPEIVEQVE AALPFDSASY ACVRDAEALA AWIARIRERG HVAIDTETTS
LDEMRAELVG ISLCVEAGSA CYIPLGHRAG GGDLFGSLDL VADQIPLDLA LSMLKPVLED
DAILKIGQNM KYDAKIFARH GIRVAPIDDT MLMSYAMHAG RHGHGMDELC DTYLGHKPIA
IKTLLGSGKS QITFDRVPVD QAVCYAAEDA DVTLRLWRLF KPQLHRARVT TVYETLERPL
VPVLAEMEMA GVQVDRDTLS RMSNAFAQKM AALEAEIHGL AGGPFNVGSP KQLGEILFER
MSLQGGVKGK NGAWGTGADV LEDLAAEGHD LPARVLDWRQ LSKLKSTYTD ALQEHIHPET
GRVHTSYSIA GANTGRLAST DPNLQNIPVR TEEGRRIREA FVAPKGKLLV SVDYSQIELR
ILAHIADIPA LKQAFREGHD IHAMTAAEMF NVPLEGMDPM VRRQAKAINF GVIYGISGFG
LARNLRIPRA DAQGFIDRYF ERFPGIRAYM DETVAFAKAH GFVQTLFGRR INTPEINAKG
PGAGFARRAA INAPIQGTAA DVIRRAMIRM PKALDGLPAK MLLQVHDELL FEVDEAAADP
VIARVREVME SASEPAVKLS VPLTVDAGRG ANWAEAH
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