Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0124 |
Symbol | |
ID | 5082532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 127678 |
End bp | 128550 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640481679 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001166340 |
Protein GI | 146276181 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.139881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGAG GGTCCATTCC CGCCCTTGTG ACGCCGTTCA AGAACGGCGA ACTGGATCTG GACACGCTGA AGAAGCTGGT TGACTGGCAG ATCGCCGAAG GCTCGACCGG CCTTGTGCCG GTGGGCACCA CGGGCGAAAG CCCGACCCTC AGCCACGAAG AGCACGAGAC GGTGATCGAG GCGGTGGTGC AGGCCGCCGC GGGCCGCGTG CCGGTGATCG CGGGCGCGGG GTCGAACTCG ACCACCGAGG GGATCCGGCT GATCCGCTTT GCCGAGCGGG TGGGGGCCGA CGCGGCGCTG GTGGTGACGC CCTACTACAA CAAGCCCACA CAGGCGGGCC TGATGGCGCA TTTCACCGCG CTTCACGACT GCTGCAACCT GCCGATCGTG ATCTACAACA TTCCCGGGCG CTCGGTGGTG GACATGACAC CCGAGACGAT GGGCCGGCTC GCACAGCTGC CGCGGATCAT CGGGGTCAAG GACGCGACCG GCAAGATCGA GCGCGTGAGC CAGCAGCGGG CCTCCTGCGG GGCGGAGTTT CTCCAGCTTT CCGGCGAGGA TGCGACGGCG CTCGGCTTCA ACGCGCACGG CGGCGTGGGC TGCATCTCGG TCACGGCGAA CGTGGCGCCG CGGCTCTGCG CCGAGTTCCA GCAGGCAACC CTGCGCGGCG ACTATGCCAC GGCGCTGGAG TACCAGGACC GGCTGATGCC GCTGCACGAG GCGATCTTCC TCGAGCCGGG GCTCGTCGGG GCCAAATATG CGCTCTCGCA GCTCGGCCTC TGCTCGGACG AGGTGCGCCT GCCGCTCGTG GGCCTCACCG ATCCGACGAA GGCACGCATC GACGCCGCCA TGCGCCACGC CGGACTGATC TGA
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Protein sequence | MIRGSIPALV TPFKNGELDL DTLKKLVDWQ IAEGSTGLVP VGTTGESPTL SHEEHETVIE AVVQAAAGRV PVIAGAGSNS TTEGIRLIRF AERVGADAAL VVTPYYNKPT QAGLMAHFTA LHDCCNLPIV IYNIPGRSVV DMTPETMGRL AQLPRIIGVK DATGKIERVS QQRASCGAEF LQLSGEDATA LGFNAHGGVG CISVTANVAP RLCAEFQQAT LRGDYATALE YQDRLMPLHE AIFLEPGLVG AKYALSQLGL CSDEVRLPLV GLTDPTKARI DAAMRHAGLI
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