Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0123 |
Symbol | smpB |
ID | 5082531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 127075 |
End bp | 127548 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640481678 |
Product | SsrA-binding protein |
Protein accession | YP_001166339 |
Protein GI | 146276180 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.357206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAGC ACTCCGATCC CAACAGCAAG CTCATCGCCG AGAACCGGCG CGCCCGCTTC GATTACTTCA TCGAGGAGGA GATCGAGGCC GGGATCATTC TCATGGGCTC CGAGGTCAAG TCGCTCCGGC AGGGCGGCTC GAACATCGGT GAAAGCTATG CCTCGGTCGA AAATGGCGAG CTGTGGCTGA TCAACGGCTA CATCGCCCCC TACCTGCAGG CCAAGACCTG GGGCCACGAA GAGCGGCGCA AGCGCAAGCT GCTCGTCTCG CGGCGCGAAC TGGCCCGGCT CTGGAACGCG ACCGCCCGCG AAGGCATGAC CATCGTGCCG ATCCGCATGT ATTTCAACGA CCGCGGAATC GTGAAGCTCA AGATCGGCAT CGCCAAGGGC AAGAAGCTGT CCGACAAGCG CGCGACCGAA GCCAAGCGCG ACTGGGGCCG CGAAAAGCAG CGGCTGCTCA AGCAACATTC CTGA
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Protein sequence | MVKHSDPNSK LIAENRRARF DYFIEEEIEA GIILMGSEVK SLRQGGSNIG ESYASVENGE LWLINGYIAP YLQAKTWGHE ERRKRKLLVS RRELARLWNA TAREGMTIVP IRMYFNDRGI VKLKIGIAKG KKLSDKRATE AKRDWGREKQ RLLKQHS
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