Gene Rsph17025_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0093 
Symbol 
ID5082680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp98970 
End bp99620 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID640481647 
ProductGntR family transcriptional regulator 
Protein accessionYP_001166309 
Protein GI146276150 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCC AGACGCGCCC CTCAGACCTG ACCGCCGCCG CCCATGAGAG GCTTTATCGT 
GCCCTGAGGG CACAGGTGAT GCATGGCGAA CTGTCGCCCG GGCAGGCCCT CACGCTGCGC
GGTCTCGCGC GCAGTTTCGA GGTCTCGATG ACCCCCGCGC GCGAGGCCGT CCGGCGCCTC
GTGGCCGAAG GTGCCCTGTC GCTCTCATCG TCGGGCCGGG TGGCGACGCC CGACCCCAGC
CCGGAGCGAA TCGAAGAACT GGCGGCGATC CGGGCCCTGC TCGAGCCCGA ACTCGCGGCT
CGCGCCCTTC CCCGCGCCCA TTTCGCGCTG CTCGACCGGC TGGCCGCCAT CAACGCCGCC
AATGCCGAGG CGGTCGTGAA GGGCGATGCC GTGGCCTACA TCCGCACCAA CCTCGAGTTC
CACCGGACAC TCTACCTCCG GGCCCAGGCG CCCGCGATGC TCGCGATGGC CGAGACCGTC
TGGCTGCAGC TCGGCCCGAC CATGCGCGCG CTCTATGGAC GGCTGCGGAG GAACGAGCCT
CCGCAGCATC ATCGCAGCAT CCTGGCCGCG CTGCGGGCGG GGGATGAGCC GGGGCTGCGG
CTGGCGGTCC GCATGGACGT GACGCAGGGG CTGCGACACC TGATCGGCTG A
 
Protein sequence
MPTQTRPSDL TAAAHERLYR ALRAQVMHGE LSPGQALTLR GLARSFEVSM TPAREAVRRL 
VAEGALSLSS SGRVATPDPS PERIEELAAI RALLEPELAA RALPRAHFAL LDRLAAINAA
NAEAVVKGDA VAYIRTNLEF HRTLYLRAQA PAMLAMAETV WLQLGPTMRA LYGRLRRNEP
PQHHRSILAA LRAGDEPGLR LAVRMDVTQG LRHLIG