Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0074 |
Symbol | |
ID | 5082662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 80830 |
End bp | 82218 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481629 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001166291 |
Protein GI | 146276132 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.490103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTT TCGACGTCAT CATCATCGGC GCGGGCCCCG GCGGCTATGT CTCCGCCATC CGCTGCGCGC AGCTCGGGCT GAAGACCGCC GTGGTCGAGG GCCGCGACAC GCTGGGCGGC ACCTGCCTCA ACGTGGGCTG CATCCCCTCC AAGGCGCTGC TGCACGCCAC CCACAACCTG CACGAAGTCC ACGAGAACTT CGAGAAGATG GGCCTGATGG GCGGCCATCC CACCGTGGAC TGGCCGAAGA TGCAGGCCTA CAAGCAGGAT GTGGTGGACG GCAACACCAA GGGCATCGAG TTCCTGTTCA AGAAGAACAA GATCACCTGG CTCAAGGGCT GGGGCTCGAT CCCCGAGCCC GGCAAGGTCA AGGTCGGCGA TGAGATCCAC GAGGCGAAGT CCATCGTGAT CGCCACCGGC TCCGAGCCCG CAAGCCTCCC GGGAGTCGAG GTGGACGAGA AGATCGTGGT CACCTCGACC GGCGCCCTCA ACCTCGACAG GATCCCCGAG ACGATGGTGG TGATCGGCGC GGGCGTGATC GGGCTCGAAC TCGGCTCGGT CTATGCCCGG CTGGGTGCCA AGGTGACAGT CGTCGAATAT ATGGACAAGA TCATCCCCGG CGCGGATGGC GAGATCATCA AGGGCTTCCA GCGCATCCTG GCCAGGCAGG GGCTCGAGTT CGTCCTCGGC GCCGCGGTGC AGGGTGTCAC GGTGCAGGAC GGCAAGGCCA CCGTGACCTG GAAGGCCAAC AAGGACGGCA AGGACTCGAG CCTCACCGCC GACACGGTGC TCGTCGCCAC CGGGCGCAAG CCCTTCACCG AGGGGCTGGG GCTCGAGGCG CTCGGCGTCG AGATGCTCCC GCGCGGCATG GTCAAGATCG ACGACCACTT CCGCACCAAC GTTCCGGGCC TCTACGCCAT CGGCGACTGC GTGCCGGGGG CCATGCTGGC CCACAAGGCC GAGGACGAAG GCATGGCCGT GGCCGAGATC CTCGCCGGCA AGCATGGCCA TGTGAACTAC GGCGTGATCC CGGGCGTGAT CTACACCACC CCCGAGGTCG CCAGCGTCGG CCAGACCGAG GAGATGCTGA AGGAGGCGGG CCGCGCCTAC AAGGTCGGCA AGTTCCCCTT CATGGGCAAT GCGCGCGCCA AGGCGGTCTT CCAGGCCGAA GGCTTCGTGA AGCTGCTGGC CGACAAGGAA ACCGACCGCA TCCTTGGCTG CCACATCATC GGACCGGCCG CGGGCGACCT GATCCACGAA GTCTGCGTGG CGATGGAGTT CGGCGCCTCG TCGCAGGATC TTGCGCTGAC ATGCCATGCC CACCCGACCT GGTCCGAGGC CGTCCGCGAG GCAGCGCTGG CCTGTGGTGA CGGCGCGATC CACGCCTGA
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Protein sequence | MATFDVIIIG AGPGGYVSAI RCAQLGLKTA VVEGRDTLGG TCLNVGCIPS KALLHATHNL HEVHENFEKM GLMGGHPTVD WPKMQAYKQD VVDGNTKGIE FLFKKNKITW LKGWGSIPEP GKVKVGDEIH EAKSIVIATG SEPASLPGVE VDEKIVVTST GALNLDRIPE TMVVIGAGVI GLELGSVYAR LGAKVTVVEY MDKIIPGADG EIIKGFQRIL ARQGLEFVLG AAVQGVTVQD GKATVTWKAN KDGKDSSLTA DTVLVATGRK PFTEGLGLEA LGVEMLPRGM VKIDDHFRTN VPGLYAIGDC VPGAMLAHKA EDEGMAVAEI LAGKHGHVNY GVIPGVIYTT PEVASVGQTE EMLKEAGRAY KVGKFPFMGN ARAKAVFQAE GFVKLLADKE TDRILGCHII GPAAGDLIHE VCVAMEFGAS SQDLALTCHA HPTWSEAVRE AALACGDGAI HA
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