Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0051 |
Symbol | |
ID | 5082460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 59542 |
End bp | 60807 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640481606 |
Product | lytic murein transglycosylase |
Protein accession | YP_001166268 |
Protein GI | 146276109 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACAGA TGGTGCGGAA ACTTCTTCTC GGACTGGGTC TGGTGGTGGC GGCTTCGCCC GTGGTGGCGG ATCCGGCGGC AGGGTCGCAG CGGCCGGTGG CGCGCGGGGA GGTGACGGTG ACCGAGGCGG AACGGGCGGC GCAGGCCGGG CTTGAAGGGT GGATCGTCGA GTTCCGCCCG CGGGCGCTGG CGGCGGGGAT CCGGCCCGAG ACCCTGGCCG CGGCTTTCCG GGGCGTGCGC TACGACGCCG AGGCCGTGGC GCGCGACCGC AACCAGGCCG AGTTCAACCG GACACTCTGG GATTATCTCG ACTCAGCCGT CTCGGAGGTG CGGATCGCCA ACGGGCGGGC GGCGCTGGTG CGGCACGGGG CGCTGCTCGA GCGGATCGAG GCGCGCTACG GCGTGCCGAA GGAGATCGTG GTGGCGGTCT GGGGGATGGA GACCTCCTAC GGGACGCGGC GCGGCGATCA TCCGCTGGTG GGGGCGCTGG CGACGCTGGC TCATGACGGG CGGCGCGCCG CCTTCTTCGA GGAGCAGCTG ATCGCGGCGC TGAAGATCCT CGACACGGGC GACGTGCGTC CCGAGGCGAT GACCGGAAGC TGGGCCGGCG CGATGGGCCA CACCCAGTTC ATGCCGACCT CCTACCTCGC CCATGCGGTG GATTTCACCG GCGACGGGCG GCGCGACATC TGGTCGGAGG ATCCGTCGGA TGCGCTGGCC TCGACGGCGG CCTATCTGGC CGGTTCCGGC TGGCGGACGG GCGAGCCCTG GGGCGTCGAG GTGCGGCTGC CCCCGGGCTT CGACTTCGCG CGGAGCGGCA AGGCCTTGCG CCAGCCTGTC GGGCAGTGGC AGGCACTCGG CCTCCGCCGG CCCGATGGCG CACCGCTGCC GGCGGGCGAG GCCGCGCTTC TCTTGCCGGC CGGGGCGCAG GGGGCGGCCT TCCTGATCTA TCCGAACTTC CGCGCGATCT CGCGCTACAA TCCGGCCGAT GCCTATGTGA TCGGCGTGGG CCATCTTGCC GACCGGCTGA AGGGCGGGCC TGCCTTCACG GGCGGCTGGC CGCGGGGCGA CCGGGCGCTG GCTGCGGCCG AGAGGACCGA GCTGCAGCGG CTGCTGACGG CGGCGGGCTT CGACACGGGC GGTGCGGACG GGATGATCGG GCCGAACACG CTCGCGGCCC TTCGGGCCTG GCAGGCGGCG CGGGGTCTCG TCGCCGACGG CTATGCCAAC GAGGCGATCC TGAACCGGCT GCGCGAGGGG GCCTGA
|
Protein sequence | MGQMVRKLLL GLGLVVAASP VVADPAAGSQ RPVARGEVTV TEAERAAQAG LEGWIVEFRP RALAAGIRPE TLAAAFRGVR YDAEAVARDR NQAEFNRTLW DYLDSAVSEV RIANGRAALV RHGALLERIE ARYGVPKEIV VAVWGMETSY GTRRGDHPLV GALATLAHDG RRAAFFEEQL IAALKILDTG DVRPEAMTGS WAGAMGHTQF MPTSYLAHAV DFTGDGRRDI WSEDPSDALA STAAYLAGSG WRTGEPWGVE VRLPPGFDFA RSGKALRQPV GQWQALGLRR PDGAPLPAGE AALLLPAGAQ GAAFLIYPNF RAISRYNPAD AYVIGVGHLA DRLKGGPAFT GGWPRGDRAL AAAERTELQR LLTAAGFDTG GADGMIGPNT LAALRAWQAA RGLVADGYAN EAILNRLREG A
|
| |