| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0048 |
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| Symbol | |
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| ID | 5082457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 55504 |
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| End bp | 56646 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640481603 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001166265 |
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| Protein GI | 146276106 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCG ATCCCGTCGC GCTGACCGCC GACCTCGTCC GCTGCCCCTC GGTGACGCCC
GAGGAGGGCG GGGCGCTCGT CCTGCTCGAG CGGATCCTGA CGGAAGCAGG CTTCGACTGC
CGGCGGGTGG ACCGGAACGG CGTGCCGAAC CTCTTTGCGC GCTGGGGGCG CAAGGGCGCC
AACCGGACCT TCGGCTTCAA CGGCCATACG GATGTGGTGC CGGTGGGCGA CGCCGCCGCC
TGGACCCGCG ACCCGTTCGG AGGCGAGATC GCGGACGGCT GGCTCTGGGG GCGGGGCGCC
ACCGACATGA AGTCGGGCGT TGCGGCCTTC GTGGCGGCGG CGGTGGATTT CGTTCAGGAG
ACACCGCCCG ACGGGGCCGT GATCCTGACG ATCACCGGCG ACGAGGAGGG CGACTCGGTG
GACGGGACGA CGGCCCTACT CGACTGGATG GCGACCGAGG GCGAGGCGAT GACGGTCTGC
CTCGTGGGGG AACCGACCTG CCCCGAGCGG CTGGGCGAGA TGATGAAGAT CGGCCGCCGC
GGCTCGATGA CGGCTTTTTT CACCGCACGC GGGGTGCAGG GTCATTCGGC CTATCCGCAC
CGGGCGAAGA ACCCGGTTTC GGCGATGGCG CGGCTGATCG ACCGGCTGGC CTCGCACGAA
TTGGACAAGG GCACCGGACA TTTCGATCCC TCCACGCTTG CCGTGACCAC CATCGACACC
GGCAACCCGG CCACCAACGT GATCCCGGCG CTCTGCCGGG CCACGGTGAA TATCCGTTTC
AACGACCGGC ACAGCGGCGC CAGCCTGATC CGCTGGCTTG AGCAGGAGGC CGCGGAGGTG
GCGGCGGAGA CCGGGGTCGA GATCGGCCTC AGCGCGAAGA TCTCGGGCGA GAGCTTCCTG
ACGCCGCCGG GTGAGCTTTC GGAGCTTGTG GCCCGTGCGG TCGAGGCCGA GACCGGCCTC
CGCCCCGAGC CGTCGACCTC GGGGGGCACC TCGGACGCGC GCTTCGTGCG CGCCCATTGC
CCGGTGGTGG AGTTCGGCCT CGTCGGCAAG ACCATGCATC AGGTCGATGA GCGGGTCGAG
GTGGCGCAGA TCGAACCGCT CAAGGCCATC TACAAGCGCA TCCTGAAAGA TTATTTCACA
TGA
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| Protein sequence | MPLDPVALTA DLVRCPSVTP EEGGALVLLE RILTEAGFDC RRVDRNGVPN LFARWGRKGA
NRTFGFNGHT DVVPVGDAAA WTRDPFGGEI ADGWLWGRGA TDMKSGVAAF VAAAVDFVQE
TPPDGAVILT ITGDEEGDSV DGTTALLDWM ATEGEAMTVC LVGEPTCPER LGEMMKIGRR
GSMTAFFTAR GVQGHSAYPH RAKNPVSAMA RLIDRLASHE LDKGTGHFDP STLAVTTIDT
GNPATNVIPA LCRATVNIRF NDRHSGASLI RWLEQEAAEV AAETGVEIGL SAKISGESFL
TPPGELSELV ARAVEAETGL RPEPSTSGGT SDARFVRAHC PVVEFGLVGK TMHQVDERVE
VAQIEPLKAI YKRILKDYFT
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