| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0027 |
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| Symbol | |
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| ID | 5082288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 35345 |
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| End bp | 36211 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640481582 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001166244 |
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| Protein GI | 146276085 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAGAG GAAGCCCTTT TCCCGCCCAA TCCCGGCCAC GGCCTCCGCT TCCGGGCCGG
TGCCCGGACC GGAGGTTCCC CGTGACAGAC GCCGACACAG CCGCGCACCC CGTCTTCCCG
GATCTGCACG GCGCCTCGGT CTTCGTTTCC GGCGGCGGCT CGGGGATCGG GGCGGCCGTG
ACCGAAGCCT TCCTTCGGCA GGGTGCACGG GTCGCCTTCG TGCAGCGTTC GGATGCCACC
GACTTCTGCG ACCGGATGGA GGACGAGACG GGCGCGCGGC CGCTGTTCCT GCCCTGCGAC
GTGACCGACA TCCCGGCGCT GCGGGAGGCG CTGGCGGAGG CGGCCGAGCG GCAGGGACCG
ATCCGGGTTC TGGTGAACGG CGCGGCGCAC GACGAACGTC ACACGACGGC CGAGGTGACC
GAGGACTACT GGGATCGGGC GATGGCGGTG AACCTCAGGC ACTACTTCTT TGCCGCTCAG
GCGGTGGTGC CGGGTATGAA GGCCGCGGGT GGCGGCTCGG TCATCAATTT CTCGTCGATC
TCCTACATGA TGGGCAATGC GGGCTATCCG GCCTACACGA CCGCCAACTC CGGCATCAAC
GGCCTGACCC GCAGCCTCGC GCGCGAGTTC GGGCCGGACC GGATCCGGGT CAATGCGCTG
GCGCCGGGAT GGGTGTTGAC CGAGCGGCAA AAGGACCTCT GGGTGACCGA GGAGGGGTTG
CAGGCCCATC TCGACCGCCA GTGCCTCAAG GATCCGCTGG AGCCCGCCGA CATCGTGGGG
GGCGTGCTGT TCCTTGCGTC GGACGTCTCA CGGATGATGA CGGGGCAGGC GCTGGTGATC
GACGGTGGCG TGGTGGTGAC GGGATGA
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| Protein sequence | MWRGSPFPAQ SRPRPPLPGR CPDRRFPVTD ADTAAHPVFP DLHGASVFVS GGGSGIGAAV
TEAFLRQGAR VAFVQRSDAT DFCDRMEDET GARPLFLPCD VTDIPALREA LAEAAERQGP
IRVLVNGAAH DERHTTAEVT EDYWDRAMAV NLRHYFFAAQ AVVPGMKAAG GGSVINFSSI
SYMMGNAGYP AYTTANSGIN GLTRSLAREF GPDRIRVNAL APGWVLTERQ KDLWVTEEGL
QAHLDRQCLK DPLEPADIVG GVLFLASDVS RMMTGQALVI DGGVVVTG
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