Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0020 |
Symbol | |
ID | 5082281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 28792 |
End bp | 30162 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640481575 |
Product | major facilitator transporter |
Protein accession | YP_001166237 |
Protein GI | 146276078 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.482167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCG GAAACAAGCG CATCTGGGGC TGGTATTTCT TCGACTGGGC GAGCCAGCCC TACAACACGC TGCTGCTGAC CTTCGTCTTC GCGCCCTATT TCGCCGAAGT GGCGCGGGCC CGCTTTGTCG CGGACGGCAT GGATCCGTCG GCCGCCGGCG CGGCCGCGCA GTCGCTGTGG GCGACGGGCC TTGGCTCTGC CAGCCTCGTC GTGGCCCTTC TTGCGCCGCT GCTCGGGGCG GTGGCGGATG CGGGCGGCCG CAGGCTCGTG TGGATCTGGG GCTTTTCCGC CTTCTACCTC GTGGGCTCGG CCGGCCTCTG GGCCCTGACG CCGGACGGAG ACGCCCTCAT CTGGGCCTTG GCCTGCTTCG GGCTTGGCTT CATGGGGATG GAGTTTGCCA CCATCTTCAC CAACGCGCTG CTGCCCGCGC TCGGGCCGCG GGACCGGATC GGCGAGATCT CGGGATCGGG CTTTGCCTTC GGCTATCTCG GCGGCGTGCT GTCGCTGGCC CTCATGCTTC TGTTCTTTGC CGAAAGTGCC AGCACCGGCC GGACGCTGAT CGGCCTGCCG CCGGCCTTCG GCCTCGATCC GGCTCTGCGC GAGGGAACGC GGGCGGTCGG GCCCTTCACG GCGGTCTGGT ATCTGCTCTT CATGCTGCCC TTCTTCCTCT GGGTCAAGGA GCCACCCGCC CCGCCGCGCC GCATGAGCCT CGGGGCAGGC CTGGCCTCGC TCCGCGGCTT TCTGATGAGC CTGCCGCGGA GGCGCAGCCT GTCGGCCTAT CTCGGCTCGT CGCTGCTCTA CCGCGACGCG CTGAATGCGC TCTACGGCTT TGGCGGGGTC TATGCCTCGG GCGTGCTGGG TTGGAGCATC ATCCAGATCG GGGTCTTCGG AGTGGTGGGG GCGGTGACGG CCACCGTCGC CTCGTGGCTC GGAGGGCACG CCGACCGGCG CTGGGGCCCG AAGCCCGTCA TCGCCACCTG CATCCTGCTT CTCTGCACCA CCTGCATCCT CATCGTCGCC ACCTCGCGCG ACAGCCTCTT CGGCCAGCCG CTGCCCGAGG GCTCGCGCCT GCCGGACCAG CTCTTCTTCC TCTGCGGTGC GCTGATCGGC GGGGCCGGGG GGGCGCTTCA GGCGGCGAGC CGGACCATGA TGGCCCGCCA CACCACATCC GAGCGCGCGA CCGAGGCTTT CGGCCTCTAT GCGCTGTCGG GCAAGGTCAC GAGTTTCCTC GCCCCGCTGC TGATCGCGAT CGCGACCAGC CTCAGCGGAT CGCAGCGCGT GGGGATCGCT CCCCTGATCG TGCTCTTCCT TGCGGGGCTC GTTCTGCTAG TCTGGGTTAA ACCGGAAGGC GAACAGCGGG CAGTGACATG A
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Protein sequence | MARGNKRIWG WYFFDWASQP YNTLLLTFVF APYFAEVARA RFVADGMDPS AAGAAAQSLW ATGLGSASLV VALLAPLLGA VADAGGRRLV WIWGFSAFYL VGSAGLWALT PDGDALIWAL ACFGLGFMGM EFATIFTNAL LPALGPRDRI GEISGSGFAF GYLGGVLSLA LMLLFFAESA STGRTLIGLP PAFGLDPALR EGTRAVGPFT AVWYLLFMLP FFLWVKEPPA PPRRMSLGAG LASLRGFLMS LPRRRSLSAY LGSSLLYRDA LNALYGFGGV YASGVLGWSI IQIGVFGVVG AVTATVASWL GGHADRRWGP KPVIATCILL LCTTCILIVA TSRDSLFGQP LPEGSRLPDQ LFFLCGALIG GAGGALQAAS RTMMARHTTS ERATEAFGLY ALSGKVTSFL APLLIAIATS LSGSQRVGIA PLIVLFLAGL VLLVWVKPEG EQRAVT
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