| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0010 |
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| Symbol | |
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| ID | 5082271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 11037 |
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| End bp | 12632 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640481565 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001166227 |
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| Protein GI | 146276068 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.570425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00544887 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCCTC GCGTTCTCGT TTCCGACGAA CTCTCCGAAA CCGCTGTCCA GATCTTCCGC
GACCGTGGCG TCGAGGTCGA CTACATGCCG AAGCTCGGCA AGGACAAGGA AAAGCTGGCC
GAGATCATCG GCCAGTATGA CGGTCTCGCC ATCCGCTCGG CCACCAAGGT GACCGAGAAG
CTGCTGGAAG CCGCCACCAA CCTGAAGGTG ATCGGCCGCG CCGGCATCGG CGTCGACAAC
GTCGACATCC CGGCCGCGTC GCGCAAGGGC GTGATCGTGA TGAACACGCC CTTCGGCAAC
TCGATCACCA CCGCCGAGCA CGCCATCGCG ATGATGTTCG CCGTGGCGCG GCAACTGCCC
GAGGCCAACG TCTCGACCCA CGCCGGCAAG TGGGAGAAGT CGCGCTTCAT GGGGGTCGAG
GTCTTCAACA AGACCCTCGG AGTGATCGGC GCGGGCAACA TCGGCGGCAT CGTCTGCAAC
CGCGCGGTCG GGCTGCACAT GAAGGTCGTG GCCTACGATC CCTTCCTGTC GGAAGAGCGC
GCGAAGCAAC TGGGCGTCAT CAAGGTCGAG CTGGACGAGC TGCTGGCCAA GGCCGATTTC
ATCACGCTGC ATGTGCCGCT GACCGACAAG ACCCGCAACA TCCTCTCGGC CGAGAACATC
GCCAAGACGA AGAAGGGCGT GCGGATCATC AACTGCGCCC GCGGCGGTCT GGTGGACGAA
GCCGCGCTGG CCGAGGCGCT GAAGTCCGGC CATGTCGCGG GCGCCGCGTT CGACGTCTTC
GAGGTGGAGC CGGCCACCGA GAGCCCGCTG TTCGGCCTGC CGAACGTCGT CGTGACCCCG
CACCTCGGCG CCTCCACCAC CGAGGCGCAG GAGAACGTGG CCCTGCAGGT CGCCGAGCAG
ATGTCGGACT TCCTGCTGAC CGGCGCGGTG CAGAACGCGC TGAACATGCC CTCGGTGACG
GCGGAAGAGG CCGCGGTCAT GGGGCCGTGG GTGAAGCTTG CCGGTCACCT TGGCGCCTTC
GTGGGCCAGA TGACCGACGA GCCGATCAAG GCGATCAACG TGCTCTATGA CGGCGCCGTG
GGCGAGATGA ACCTCGCCGC GCTGAACTGC GCCACCATCG CCGGCATCAT GAAAGCCACG
AACCCCGACG TGAACCTCGT CTCGGCGCCG GTCGTCGCCA AAGAGCGCGG CATCCAGATC
TCGACGACCA CTCAGGAGAA ATCGGGCAGC TTCGACGCCT ACATCAAGCT GACCGTGGTG
ACCGACAAGC GCGAGCGGTC GGTCGCGGGC ACCTGCTTCT CGGACGGCAA GCCGCGCTTC
ATCCAGATCA AGGGCATCAA CATCGACGCC GAGGTTGGCC GCCACATGCT CTATACCACC
AACGAGGACG TGCCGGGCAT CATCGGCCTT CTCGGCATGA CGATGGGCAA GAACGGCGTG
AACATCGCGA ACTTCACCCT CGGCCGGACC TCGGTCGGGC AAGAGGCCAT CGCGATCCTC
TACCTCGATC AGGCCATTGA TCCGAAGGTC GTCGAGACGC TCGAATCGAC CGGCATGTTC
CAGCAGGTCA AGCCGCTCGA GTTCGACGTC GCCTGA
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| Protein sequence | MAPRVLVSDE LSETAVQIFR DRGVEVDYMP KLGKDKEKLA EIIGQYDGLA IRSATKVTEK
LLEAATNLKV IGRAGIGVDN VDIPAASRKG VIVMNTPFGN SITTAEHAIA MMFAVARQLP
EANVSTHAGK WEKSRFMGVE VFNKTLGVIG AGNIGGIVCN RAVGLHMKVV AYDPFLSEER
AKQLGVIKVE LDELLAKADF ITLHVPLTDK TRNILSAENI AKTKKGVRII NCARGGLVDE
AALAEALKSG HVAGAAFDVF EVEPATESPL FGLPNVVVTP HLGASTTEAQ ENVALQVAEQ
MSDFLLTGAV QNALNMPSVT AEEAAVMGPW VKLAGHLGAF VGQMTDEPIK AINVLYDGAV
GEMNLAALNC ATIAGIMKAT NPDVNLVSAP VVAKERGIQI STTTQEKSGS FDAYIKLTVV
TDKRERSVAG TCFSDGKPRF IQIKGINIDA EVGRHMLYTT NEDVPGIIGL LGMTMGKNGV
NIANFTLGRT SVGQEAIAIL YLDQAIDPKV VETLESTGMF QQVKPLEFDV A
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