Gene Saro_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3804 
Symbol 
ID5077952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp459336 
End bp461468 
Gene Length2133 bp 
Protein Length710 aa 
Translation table11 
GC content63% 
IMG OID640481527 
Productphage integrase family protein 
Protein accessionYP_001166189 
Protein GI146276029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTGA CGCCGCTGGC GCTCGTCGGC GGCACGCCGC ACGATACCGA TCGCTACAAC 
AACTGGCTTG AGGGGCGCCT CGCGGAGATA TCCCCCCTCC TCGTCGCCAA TCCCATTTGG
TCGGACGCCA TGATGGGTGA GGTGTTCGGC CATCCCTGGC TGAGCCAGAC ATACGCAAGC
TTGCCGCTTC AGGCTGCGGT TCCGGTACTC ACCAACGAGA TCAAGGCTTA CCTGGCGGTA
TCCGTTCTCG ACGATCGCAA GGCGGACGCC CACTGGTTCC AGCGCCGGAT CCCGGTGATC
CGCTATCTGG TAGAGGAAGG CGCGGACCTG CTTGGTCACT TTGAGGCGGG CTGCCTTGCC
GACATCCCTC ACCCCGGCTT CGCGCCATCA GATGACGAGG GTGCGCGCAA ACGGAACCAC
CACAACGATG CAGTGCTGGA GTGCTACGCC GCCTGGTATG GCGCGAATTA TGGACGGCGC
AGGCAAAGCC AGACCCGCCA GTGGATCCGG GGCGGCAAGA TCGTCACCAG CGAGTTCCGC
TCACCGGAAG TGCAGCTGTT CGGTGATATC CATCGCTTCG CGATCATCAA CCGGGCGCAG
ATGGCACCGA TGCATGACCG CGACATCATC CTGCTCAACG ATCTCTACAG CGAGGAGGAC
ACACGCTTCC GCGATCGGCA ACGGCGAAGC GACACCTATA TCAACTTCCT GAACTTCGAG
CCGTGGCTGC GCCCGCTGAT GCGCGGCTTC CTGCTCGACA AGGTCGCACA TGGGGAATTT
GCGCCAAGAA CGGTGATCGC GATGCGATCT CGGTTACGGC TGTTTGCGCA GTTCCTCCAC
GAAGAATCCG TCGCTGGTCC TGCGAAGATC AACGAACTAA CGATGGAGCG CTATCTTGCA
TGGGGAAACG CGCGCAATGC CGCCGGCAAG AACTGGTACA CCGACATCGT CCAACTGATG
CGGGCAGCAC CGGTGCTACT GCCGGGGGAA TGGCCGCGGA TCGCGCTCGA CAAGCGCGCG
GCGCGGCGCA TCCGTTACAA GCAGGCACCG GATGACCCGC GCAACCGGCT CTACGCTTCG
CGAGAGGGCG CCAACCGGGC GGCGCCTCCT GAGGCCTTGG CCGCGATGAT GGCCAGGCTC
GATGAACTGC CTGCCCCTAT CCCGGTAATC TTCATGATCG GGATCACCAC CGGTGCGCGA
GCCGAAGACC TGCATGCCTT GCTCTTCGAC TGCCTGCGGC CCGATCCGCA CGACAAGCGG
TTCATGCTGT TCACGTTCTG GCAGAACAAG GTCAGCCGCT GGAACACCAA GCCCTTGCTG
GCGACCGATC CCGCGCACCG GGCCATGATC GAGTTGATCG AAGCCCAGCA GGATCGCGTC
CGGCAGCGTT ACGGGCGCGC CACGAAATAC CTGTTCCCCG TCTTTTACGG CAAGCGGGAA
TCGTTCCTCG GCTACAACTG GACCTTGCAG GAGCTCAGGA TGCTGTGCCT CAGGCACGGG
ATCGTCGATG GCGAAGGCAA GCCGTTCGAC TTCTCATGGC ATCCGTTGCG CCACCATCGA
GGGACACAAA TGGCGGCCGA AGGCCACGAC ATCCTGAGCA TCATGTTCGA GCTCGGCCAT
GCCTCGCCGG ATATGGCGTC GATGTACGTC AACAAGCGTC TCGATCTCAA GAAGAACGCC
TTGCTGCGAA AGGGTGGCGG CCAGTTCTTC ACAATCGCGG GCAAGGTCGA CGAAGCGGTC
GGCGATCTCC TGCTGCGCAA GGAAACCATG CTGGCCACGC GGGTCTGCGG CGGCGCCTGC
ACGCTGCCAG GGCAACTCGG CGAATGGTGC GAGCACGCCC ACGCCTGCCT GACCTGCCGG
TTCTTCCGCG CCGATGGCGG CGACGTGGAG CACTTCCGCT GTGAACGGGC CGGACTTTAC
GCCGCGATCG AAGGGCTCGA GCAGGAAGCG CAGAACTACG AGGAAGGCGG ACAGACCCGC
ATGGCCGACA TCACGCGAAA GCGCCTGCAA CGCAATAAGG ATGCGGTCCA CAACACCGAC
ACCATCATCC GCTCCATCGA GGAGCACGGC CTCTACAAGG GTGAAAAGCA GCGCTACAGG
CCGGCCACTG CTCGAGAGGA AGCGACGTCA TGA
 
Protein sequence
MGLTPLALVG GTPHDTDRYN NWLEGRLAEI SPLLVANPIW SDAMMGEVFG HPWLSQTYAS 
LPLQAAVPVL TNEIKAYLAV SVLDDRKADA HWFQRRIPVI RYLVEEGADL LGHFEAGCLA
DIPHPGFAPS DDEGARKRNH HNDAVLECYA AWYGANYGRR RQSQTRQWIR GGKIVTSEFR
SPEVQLFGDI HRFAIINRAQ MAPMHDRDII LLNDLYSEED TRFRDRQRRS DTYINFLNFE
PWLRPLMRGF LLDKVAHGEF APRTVIAMRS RLRLFAQFLH EESVAGPAKI NELTMERYLA
WGNARNAAGK NWYTDIVQLM RAAPVLLPGE WPRIALDKRA ARRIRYKQAP DDPRNRLYAS
REGANRAAPP EALAAMMARL DELPAPIPVI FMIGITTGAR AEDLHALLFD CLRPDPHDKR
FMLFTFWQNK VSRWNTKPLL ATDPAHRAMI ELIEAQQDRV RQRYGRATKY LFPVFYGKRE
SFLGYNWTLQ ELRMLCLRHG IVDGEGKPFD FSWHPLRHHR GTQMAAEGHD ILSIMFELGH
ASPDMASMYV NKRLDLKKNA LLRKGGGQFF TIAGKVDEAV GDLLLRKETM LATRVCGGAC
TLPGQLGEWC EHAHACLTCR FFRADGGDVE HFRCERAGLY AAIEGLEQEA QNYEEGGQTR
MADITRKRLQ RNKDAVHNTD TIIRSIEEHG LYKGEKQRYR PATAREEATS