Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3783 |
Symbol | |
ID | 5077931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | - |
Start bp | 423472 |
End bp | 425598 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640481506 |
Product | Cache sensor signal transduction histidine kinase |
Protein accession | YP_001166168 |
Protein GI | 146276008 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCTTGG CTCGTTGGCT GGGGGCATCC TATCTGCGCA CGGCCGTGAT CCCCCTTTGC ATTATCGAGC TGGGCTTCCT CCTGAGTTAT TGGGCAACCG GTAACTTCAC GTATCAGCGC AATGTCGATA CGGTTAACGC ACTGTCCGAG CAGTACCTCG AGGACATCGC CACGCGCGAG GCCGCAAACA TCGATGCCGC GCTGGGCAGC GTCGAGGGAC TCGCAAGGGT ATTCGCCGCA GAGGCAGGCG AGGCGCTGCG CACGCCCCAC GACGCACCCG CTTCGGAAAA GGCGCGATAC CATCTCGGAC CCGACGGCGC GTTCCATACT TTGCGCGGCG GCCCTGAAGA CACAGCCAGC TTCTACAGCG GCTATCATCA CGTCGGTCCG CGGGAGATCG AAAAGGTCTG GCGCACTTCG CAGCTCGACC ACACGATGCG CCACATCAAG GCCGCATCGC CGCTGGTACG GCAAGTCTAC CTCAACACCT GGGACAGCTA CAACCGCATC TACCCCTACT TCGACGTGAC GAGCCAGTAT GCGCCGAAGA TGAACATCCC GTCCTACAAC TTCTATTACG AGGCGGACGA GAAGCATAAT CCGGCACGCA AGGTCGTCTG GACCGATGCC TATGTGGACC CGGCCGGTAG CGGCTGGATG GTTTCCGCGA TCGCCCCCGT CCATCTGTCG AACCGGCTGG AGGCAGTGGT CGGCATCGAC CTGACGGTCG AGACGATGAT CCGCCGCATT CTCGCGCTGG ACTTGCCGTG GGATGGATAT GCGATGCTCG TGGGTCGCGA CGGCACGATC CTCGCGCTGC CGCCTGCAGG CGAGAAGGAC CTGGGTCTGG CCGAACTGAA GGACCACGAC TACGCCGACG CGATCCGGTC CGACACATTC AAGCCCGAAC AATTCAACAT CGTCCGCCGG CCCGAATTGA AGGCCCTGGC TAACGCCATC GTCAGCGGAA AGACCACGGT CAACCACATC GCGCTGGGCG GACGCACGAT GCTGGCGGCA AATGCCCGGG TGACGGGACC GGGCTGGACC CTCGTCGTGC TCGCACCGGC CTCGCAGATT CTCGCCGATG CAAGCACGCT CCACGATCAA CTGATGCAGG TCGGGTTCAT CATGCTGCTG ATCCTGCTCG CCTTTTATGC CCTGTTCTTT GCGTTCCTGC TGTGGCGCGC CCGGGTGATG AGCAAGCAGG TCGCCGAGCC GCTGCGCGCC GTGGAAGGCG TGATGGCAAG GATCGGTGCC GGCGAGTACG AACAGGAAGC GCCCCGCTTC GGCGTGCAGG AATTCGACAA CCTTTCCGAG CGGCTTGTCG AGACCGGGCA CACGCTGGGA CGCGCCCATC GCCAGATCGT GGAGCAGGAA GCCGAAGTGC GCCGCGCGCT CGATACCGAA CGGCGGGTCA CCACCGGCCA GCGGCGCTTC ATCAACATCC TCAGCCATGA ATTCCGGACG CCGCTGACCG TCATCGACAG TTGCGGGCAG ATCCTCAGGC GGCGCGCAAC ACGATTGACG GCGGAGGCCA CCGTCGAGCG CGCGGACATG ATCCGCCGTG CTGCCGCGCG CATCCGCGAA GTCATGGAAA GCGCGTTGCA ACTGGTGCGG ATGGAAGATG GCGAGACCAC CTGCCGACCG AGCGCGGTAG CGGTGGTCGG ACTGGTTCGC GATGCCATCC GGTCCGCGAG TGAAGGGCGC GAAGTTGTGG CCAGCTTCAC GCCAGAGGCG GAAAGCGCGT CGGTGCTCGT CGACAGGGCG CTCGTTCACA GCGCGCTTGC CGCGATCGTC GAGAACGCCT GCCGCTATTC GCCAGAAGGC ATGATCGTCG AAGTCGGCGC CAGGATCGAA GGAGGCCGAT GCATCGTGAG CGTGCGTGAC GAAGGCCCCG GCATTGCGGC AGAGGACCTG CCGATGGTGC GCGAGCGCTT CTGGCGCGGG GCCAACAGCA CTGCGGTTCC TGGCGCGGGC ACGGGGCTTT ACCTGGCCTC GACGCTGATC GACGCCAACG GCGGTTTGCT CGACATCGCA TCATCGGCAG GCGGCGGCAC GGTGGTGACG GCCAGCCTGC CGCTGGCCGA GGTTACGGTT ACCGAATTGT GGGAGGCAAC TGCGTGA
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Protein sequence | MPLARWLGAS YLRTAVIPLC IIELGFLLSY WATGNFTYQR NVDTVNALSE QYLEDIATRE AANIDAALGS VEGLARVFAA EAGEALRTPH DAPASEKARY HLGPDGAFHT LRGGPEDTAS FYSGYHHVGP REIEKVWRTS QLDHTMRHIK AASPLVRQVY LNTWDSYNRI YPYFDVTSQY APKMNIPSYN FYYEADEKHN PARKVVWTDA YVDPAGSGWM VSAIAPVHLS NRLEAVVGID LTVETMIRRI LALDLPWDGY AMLVGRDGTI LALPPAGEKD LGLAELKDHD YADAIRSDTF KPEQFNIVRR PELKALANAI VSGKTTVNHI ALGGRTMLAA NARVTGPGWT LVVLAPASQI LADASTLHDQ LMQVGFIMLL ILLAFYALFF AFLLWRARVM SKQVAEPLRA VEGVMARIGA GEYEQEAPRF GVQEFDNLSE RLVETGHTLG RAHRQIVEQE AEVRRALDTE RRVTTGQRRF INILSHEFRT PLTVIDSCGQ ILRRRATRLT AEATVERADM IRRAAARIRE VMESALQLVR MEDGETTCRP SAVAVVGLVR DAIRSASEGR EVVASFTPEA ESASVLVDRA LVHSALAAIV ENACRYSPEG MIVEVGARIE GGRCIVSVRD EGPGIAAEDL PMVRERFWRG ANSTAVPGAG TGLYLASTLI DANGGLLDIA SSAGGGTVVT ASLPLAEVTV TELWEATA
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