| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3771 |
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| Symbol | |
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| ID | 5077919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 409016 |
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| End bp | 411400 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640481494 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001166156 |
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| Protein GI | 146275996 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000982846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGAACC TGCTTGCCGC TACGGCACTG AGCACGCTCG CCGCCATTTC GGCGCCAGCT
TTTGCGCAGG AAGCGCCCCA GTCGGCGGAC GCCCAGGATT CGGCTGCTGA CGCCGGCCCC
GGCATCGGTG AAATCGTCGT CACGGCGCAG AAGCGTTCGG AAAACATTCA GAACGTGCCG
ATCGCCATCT CGGCCGTCGG CAGCCAGTTC CTCGAGACGC GCGGCATCAC CTCGATCGAC
AGCCTTGGCT CGGTCGCCCC GAACGTGAAG TTCGAGCGCG CGCCTTCGAA CAAGACCATT
TCGCAGATCG CAATTCGCGG ATCGGTGACG ATCAACCCGG CGATCACCTG GGAGCCGGCT
GTCGGCCTCT ACCTGAACGG CGTCTACATC GCGAAGGCGC AGGGTTCGAT CTTCGACGTT
GCCGACCTCG AGCGCGTCGA AATCCTGCGC GGCCCGCAGG GCACGCTCTA TGGCCGCAAT
GCGCTGGCAG GCGCGGTCAA TCTGGTGCCC AAGATGCCGA GCGGCGAACT GGGCTTCAAG
GGTGAGGTCA GCTATGGCAA CTACGATTAC TGGAAGGGCC GTGCCGTGCT CGACCTTCCG
GCGTTCGGGC CCTTCTCGCT CAAGCTTTCA GGCCAGATCC AGAAGCGCGA CGGCTTCATC
AAGCTGACGC CGAACCCCTA TCCGGAAGCT TTTCTCGCAG GCCCCGCGCG CACCGGCCGG
ACCAATGACC TCGACGGCAA GAGCGGCATG GCGCAGCTGC GCTTCAAGCC TGAAGGCAGC
AACTTCACCG CCGACTACAT GTACGACTAC TCGAAGTTCG ACCAGCGGCC GGACTACGCG
CAGCTCGTGC ACGTCAACCG CAATGGACGC CCCGAGGACA TCTTCGATCC GAACTCGGCC
GGCTATCCGT ACGGCGGCGC GTTCTTCCCG CTCAATCTCT ATGACCGGAC CGACCGCCAA
TCGAGCGCTT CGCTCGACGC CGATCCGCTC TACGAGAAGT CGCGCACTTA TGGGCATGCG
CTGACCCTGA CGCTGGACGT CGGCGCGGCC ACGATCAAGT CGATCACGGC CTATCGCAAC
ACGCGCTGGA AGGACTCGCT CGATCTTGAC GGTTCGCCGC TGCCGGTCGC GTTGACCCAG
CGCGATACTC GCTTCCACAG CTGGAGCCAG GAACTCCAGG CTTCCGGCGA AGCTCTGGGT
GACCGCCTGA AGTACGTGGC CGGCGTGTTC TATTACAAGG AAAAGGCCGA AACGCTCGGG
CCGCAAAGCT TCTTTGGCGG CGGCGCTTCC TATCAGTCGG ACTATGGCTC GCACACCGAG
GCTCTCGCTG TTTTCGCGCA GCTCGACTAC GACATCACCG AAGCGCTCAA GCTGACGCTC
GGCGGGCGCT ATACCCACGA GAAGAAGGAC ATCCGCCGCT ACTTCCGCAT CAACTACGAT
GCGGCGAACG AGATTTTCTC GCCGCTGGTC GTGGCCGACA TTCCTTATGG CGGCGTGCCG
GACGCGAAGT ACAACCGCTT CAACCCGGCG ATCACGCTGG CCTACCAGGC GAACCCGAAC
ATCAATCTCT ATGCGCGCTT CGCACAGGGT TTCAAGTCGG GCGGCTTCAA CGGCGAGACG
AGCGACTTCC GTGCGCCTAC CGCAGCCTGC CCGACGGGCG CGGTTGAACT GTGCAATCCC
TATCGTCCGG AAACGGTCGA CAGCTATGAA GTGGGCGTGA AGACCCGTCT TGCCGACGGC
AAGGTGATCT TCAACGTCGC CGGCTTCTGG GACGAGCACA AGGACATCCA GCTTTCGGTG
TTCACTGCCG GTGCCGGTGC TGCCTCGATC GTCAAGAACG CGGCCAAGGC ACGCATCCGC
GGGCTTGAGA TCGAGACGGT GATCCGCCCG GTCGATGCAG TGACGATCAA CGGTTCGCTC
GCGTTCCTCG ACCCGAAGTA CAAGAGCTAC ATCGACGCGG TTGATGGGGT CGACACCGAC
GTTTCGAAGA ACCGCGCGTT CCCGCACACG CCCAAGACGA CTGCCTCGAT GGGCGCGGAC
GTTCGCGTGG CGCAGGGCGA CTGGGGCAGG TTCAACATCA ATGGCGATGT GAACTACGTC
TCCAGCTACT ACACCTTCCC ATATGCCCTG GTGACGCCGA ACGCTTCGGC GCAGAACGCC
AACAACACCA AGTCCAAGGG CCGCACCATC GTCAATCTGC GCGCAAGCGT GGCGGAAGTG
CCGCTGGGCG GTGCCAAGGC GGAATTCGCG CTGTGGGTTA AGAACCTGAC GAAGGAAGAT
AATCCTTCGA ACTTCATCGA CTTCGGTCCC AGCTTCGGCG GGCTGACCGT CGGCTACTTC
CCCGATCCGC GCACCTACGG GCTTACTCTC GGCGTCAAGT TCTGA
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| Protein sequence | MRNLLAATAL STLAAISAPA FAQEAPQSAD AQDSAADAGP GIGEIVVTAQ KRSENIQNVP
IAISAVGSQF LETRGITSID SLGSVAPNVK FERAPSNKTI SQIAIRGSVT INPAITWEPA
VGLYLNGVYI AKAQGSIFDV ADLERVEILR GPQGTLYGRN ALAGAVNLVP KMPSGELGFK
GEVSYGNYDY WKGRAVLDLP AFGPFSLKLS GQIQKRDGFI KLTPNPYPEA FLAGPARTGR
TNDLDGKSGM AQLRFKPEGS NFTADYMYDY SKFDQRPDYA QLVHVNRNGR PEDIFDPNSA
GYPYGGAFFP LNLYDRTDRQ SSASLDADPL YEKSRTYGHA LTLTLDVGAA TIKSITAYRN
TRWKDSLDLD GSPLPVALTQ RDTRFHSWSQ ELQASGEALG DRLKYVAGVF YYKEKAETLG
PQSFFGGGAS YQSDYGSHTE ALAVFAQLDY DITEALKLTL GGRYTHEKKD IRRYFRINYD
AANEIFSPLV VADIPYGGVP DAKYNRFNPA ITLAYQANPN INLYARFAQG FKSGGFNGET
SDFRAPTAAC PTGAVELCNP YRPETVDSYE VGVKTRLADG KVIFNVAGFW DEHKDIQLSV
FTAGAGAASI VKNAAKARIR GLEIETVIRP VDAVTINGSL AFLDPKYKSY IDAVDGVDTD
VSKNRAFPHT PKTTASMGAD VRVAQGDWGR FNINGDVNYV SSYYTFPYAL VTPNASAQNA
NNTKSKGRTI VNLRASVAEV PLGGAKAEFA LWVKNLTKED NPSNFIDFGP SFGGLTVGYF
PDPRTYGLTL GVKF
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