Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3770 |
Symbol | |
ID | 5077918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 407736 |
End bp | 408845 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640481493 |
Product | regulatory protein, LuxR |
Protein accession | YP_001166155 |
Protein GI | 146275995 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00240032 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAATCT CGGCCATCGA CCAGCGCGCG CTGCACCTGT CCCTTATCGA GGGTATCCAT GAGACGCCCC CGTTCGGCCT GTTCATGCGC AATCTCGTTG CGCTCACCGG CGCGCGCCGT GCGTTCATGC TGGTGCAGCT CGCCAATGCC GCACCGGGGC AGGAACCGGC GGTGATCCAT GTCACCGCGC CGCGCGCCGC ACAGGAGCCG CCGCTGGACT TCGTCCGCCT GCATGAATTG CGCCTGCATC CCTATGGCGC CCTGCGCCCG GAGCGCGTCT ACGCGCTCGA CGAGATGCTC GACTTCGATA ATCCGGCGCA GCTCGAACGG CAGAAGGCGG CGCTGGCGGA CATGGATATC CGCTATGGCC GCTGGCTGCG CGTCAGGGCG GGCGGGGCGG CGGACGCCTG GCTTGTACTG GTGCGCCAGC GCGAGGACTT TACGGCCAGC GCTGTCGCGA CGTTATCGGC CGTCGCGCCG CACCTTGCAT CGGCACTGCG GACGCTGGTG GCGCTCGTGG GCAGCAGGTT GCAGGCGGCA CTGGCGCAAT CGGCGCTGGC GCGTCTCGGC ATCGGGCAGG TGGCGCTCGA TGCCGCCGGG CGAGTGATGG CGGCAGATCC AGGCGCAGAG GCGCTGCTTT CGTTTGCCGT GGAGCCGGAG CCGGTCGCGG GCCGCCGCCT GCAACTGGTC CCAGCCACTG CCCGCATGCT TGAACGGGCC TGCGCGGAGA TCGCGTCGGG CGTCGGGGAT TTGCGCGTCA TGTCGCTGGA TGCGCGGCGC GGCATCGACA TCGTCCTGCG ACGCTCGGAC CTGCGCCTAA CCGAGCCCGA CGCCCGCCCC GAAGTCGTGG GCACCCTCCG CGTTGACCGT CGCGAGAACG AGGCTGCGGG CGCTGCCGTT CTCCAGGCGG TCCACGGTCT GTCCCTGCGC GAGGCGGAAC TGGCCATCGC GCTTTCCAGG GGCGAACCTC TGGTCGAGGC AGGCATGGCC CTCGGGCTCA CCGCCGAGAC CGCGCGCAAC TATTCCAAGC GCATTTACGC CAAGACCGGC GCTACCGGGC AGGCGGATCT CGTCCGGATG ATCCTGACGG GCCTTGCCCC CTTGGCCTGA
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Protein sequence | MTISAIDQRA LHLSLIEGIH ETPPFGLFMR NLVALTGARR AFMLVQLANA APGQEPAVIH VTAPRAAQEP PLDFVRLHEL RLHPYGALRP ERVYALDEML DFDNPAQLER QKAALADMDI RYGRWLRVRA GGAADAWLVL VRQREDFTAS AVATLSAVAP HLASALRTLV ALVGSRLQAA LAQSALARLG IGQVALDAAG RVMAADPGAE ALLSFAVEPE PVAGRRLQLV PATARMLERA CAEIASGVGD LRVMSLDARR GIDIVLRRSD LRLTEPDARP EVVGTLRVDR RENEAAGAAV LQAVHGLSLR EAELAIALSR GEPLVEAGMA LGLTAETARN YSKRIYAKTG ATGQADLVRM ILTGLAPLA
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