| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3719 |
|---|
| Symbol | |
|---|
| ID | 5077867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 356045 |
|---|
| End bp | 356722 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640481442 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001166104 |
|---|
| Protein GI | 146275944 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.379017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCAA TCATTGTGAC TGGCGGCTTT GGAATCCTTG GCCGGGCGGT CGCCGAAACC
TTCCGCGCCA ACGGAGACCG CGTGGCCCGT ATCGACTTTG CGCCAGACGC GCCCGATGCC
AATCCGGGCG GTCTCGACAT CGGCGGCGTC GACCTGACCG ATGGCACCGC TGCTGACGCT
GCCGTGCAGC AGGTCATCGC CGAACAGGGT GGGATCGACG TTCTGGTGAA CGTAGCCGGG
GGCTTTACAT GGCAGACCCT GACGGACGGC GGCCCGGAAA CCTGGGCGCG CATGTATGCG
ATGAACGCCG CGACCTGTGT CACCATGACC AAGGCCGCGC TGCCGACGCT GGCGGCAACG
CCGGGCGCGG CTATCGTCAA CATCGGTGCG GGCAGCGCGC TTCTCGCCGG GGCGGGAATG
GGCGCCTATG CCGCGTCGAA GAGCGCGGTC CACAAGCTGA CCGAAAGCCT CGCCGCCGAA
CTCGCCGGAA CCGATTGCAC GGTCAATGCG GTGCTGCCCA GCATTATAGA TACGCCGGCA
AACCGCGCCG ATATGCCCGA CGCCGACGTC TCGCAATGGG TGCAGCCCGC CTCGCTTGCG
AAGGTCATCC TGTTCCTCGC CTCGCCCGGT GCACGCACGA TCAGCGGCGC CCTTATCCCG
GTCTCGCGCG GCGGCTGA
|
|---|
| Protein sequence | MRSIIVTGGF GILGRAVAET FRANGDRVAR IDFAPDAPDA NPGGLDIGGV DLTDGTAADA
AVQQVIAEQG GIDVLVNVAG GFTWQTLTDG GPETWARMYA MNAATCVTMT KAALPTLAAT
PGAAIVNIGA GSALLAGAGM GAYAASKSAV HKLTESLAAE LAGTDCTVNA VLPSIIDTPA
NRADMPDADV SQWVQPASLA KVILFLASPG ARTISGALIP VSRGG
|
|---|
| |