Gene Saro_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3510 
Symbol 
ID5077659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp120424 
End bp121707 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content66% 
IMG OID640481234 
Productmajor facilitator transporter 
Protein accessionYP_001165896 
Protein GI146275736 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.935373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAG CTTCCGCCCC CACGCTCGAT GCCGCCTCGG CCAAGGCGGG CCGCTATCGC 
TGGGTGATCG TTGGCCTGCT CTTCGCGGCT ACTGCGGTCA ATTACATCGA CCGCCAGATG
ATCGGCGTCC TCAAGCCGAC TCTCGTCGCT GAGTTCGGCT GGACCGAGAG CGACTTCGCC
AACATCGTCT TCTGGTTCCA GATGGCCTAC GCCATCGGCT ACATCGGCTT TGGCCGCGTC
GTCGATGCGG TTGGCGCGCG GCTTGGCTAT ACCATCGCCA TCGTCATCTG GACGATCGGG
CACATGGCGC ACGGCTTTGC CACCGGCGTC GCCAGCTTTG CCGCCGCGCG CTTCGGCCTC
GGCGTGGGCG AGAGCGGGAA TTTCCCCGCC GGCATCCGTG CCGTGACCGA CTGGTTCCCC
CAGCGCGAGC GCGCCTTCGC CATCGGCCTG TTCAATGCGG GCGCCAACGT CGGCGCGATC
ATCACCCCCT TGCTCGTGCC CGTGCTGGTG CTGTGGTTCG GCTGGCGCGC GGCATTCTTC
CTGACCGGCA TCTTCGGCGT GGCCTGGCTT GTCGCCTGGT GGTTCATCTA TCGCCACCCC
GCCGAGCACA AGCGCGTGAC GCCCGCCGAA CTCGCCTGGA TCGAGCAGGA CCCCGCCGAT
CCGGTTGAGA AGATCGGCTG GAGCCGCCTC CTCACCGTGC GCGAGACCTG GGCCTATGCC
CTGGGCAAGT TCCTGATCGA TCCGATCTGG TGGTTCTTCC TGTTCTGGCT GCCGGGCTAC
CTGTTCGAAC GCTACGACAT GGATCTCAAG ACCTTCGGCC TTCCGCTCGC CGCGATCTAC
CTGATTTCCG ACGGCGGCTC GATCTTCGGA GGCTGGATGT CCTCGCGCCT GATCAAGGCG
GGCCGCACGC CCAACTTCGC CCGCAAGATG ACAATGCTGC TCTGCGCTAT CCTCGTCCTG
CCGATCTGGT TCGCGCAGAG CCTCGACAGC GTGTGGGCCG CCGTGCTCAT AATCGGCCTC
GCGACGGCCG CGCACCAGGC CTTTTCCGCC AATCTCTACA CCCTGCCATC GGACGTCTTC
CCGCGCGGCG CTGTGGGATC GGTGGTCGGG ATCGGCGGCA CGGTCGGCGC GCTTGGCGGC
ATGGGCATGG CGCTGTTCAC CGGCTACATC CTCGACAAGA CCGGCAGCTA CGAGATCCTC
TTCGCGATCT GCGCCAGTGC CTATCTTCTT GCGCTTGCCG TTGTCCATTT CCTCAGCCCG
CGCCTCGCGC CCGCGCGGGT CTGA
 
Protein sequence
MVEASAPTLD AASAKAGRYR WVIVGLLFAA TAVNYIDRQM IGVLKPTLVA EFGWTESDFA 
NIVFWFQMAY AIGYIGFGRV VDAVGARLGY TIAIVIWTIG HMAHGFATGV ASFAAARFGL
GVGESGNFPA GIRAVTDWFP QRERAFAIGL FNAGANVGAI ITPLLVPVLV LWFGWRAAFF
LTGIFGVAWL VAWWFIYRHP AEHKRVTPAE LAWIEQDPAD PVEKIGWSRL LTVRETWAYA
LGKFLIDPIW WFFLFWLPGY LFERYDMDLK TFGLPLAAIY LISDGGSIFG GWMSSRLIKA
GRTPNFARKM TMLLCAILVL PIWFAQSLDS VWAAVLIIGL ATAAHQAFSA NLYTLPSDVF
PRGAVGSVVG IGGTVGALGG MGMALFTGYI LDKTGSYEIL FAICASAYLL ALAVVHFLSP
RLAPARV