| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3453 |
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| Symbol | |
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| ID | 5077602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 55829 |
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| End bp | 58399 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640481177 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001165839 |
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| Protein GI | 146275679 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0426513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC TGCTTGCCGC GGGCGCGAGC CTGCTTGCCT TATCGCTTTC GACTCAGGCC
TTTGCGCAGG ATGCCGCACA GGCGGAAGAC AAGTCGCCCA ACATCGAGGA AATCGTCGTC
ACCGCGCAGT TCCGCGCGCA GAACCTTCAG GACACGCCGC TGGCGATCAC TGCCGTCAGC
GGTGAACTCC TCGCGCAGCG CGGCCAGACC AACGTCAGCG AAATCGCCGC GCAGTCGCCC
AACGTTACGT TGAAGCCCCA GGGCCAGGAA CTCGGGCCGG GCATCATCGC CTTCATTCGC
GGCGTCGGCC AGACCGACCC CAACTTCGCG CTCGAACCGG GCGTGGGTAT GTACATCGAC
GATGTCTACC TGCCCACGCT GACCGGATCG CTGCTCGACC TGACCGATCT CGATCGCGTC
GAGGTGCTGC GCGGTCCCCA GGGCACGCTC GCCGGCCGCA ATTCGCTCGG CGGCTCGATC
AAGCTTTATT CGAAGAAGCC AGAAGGCAGC AACACCGGCT CGGTCGAGGT GACCTATGGC
CGCTACAACC GTCTAGATGC GCGCGGTCTG TTTGACGTCA AGCTCTCGAA CAACCTGTTC
ATGCGTGTCG CCGGCGTGAC CAAGAACGTC GACGGCTACG TCAAGCGGCT CGACTACAAC
CTGACCCATC CGGGTACCAA CGTGCCTACG CTGGCCAAGG GTTCGAACCC GGTTCTCGGC
ACGCTCGGCG GGCAATCCTA TGCCGCGGGC AAGGTCTCGC TGCGCTGGCA GCCGACCGAG
ACGATCGATA TCAACCTCAC CGGTGACTAC ACCCGCGAAC GCAACGAACC GGGCGCGAAC
GTCCTGCTCT TTGCCAATAC CTCCGCAACG TTCGATGGCC CGAACGCGGC GGGCACCGGG
GGCCGTCCGT TCCTCGCGGG CACTGATGGG GTCGGCATTC CGCTCAACTG TGCTTTTGTG
CCGAACGGGG CGAATAGCTG CGACACGATC AGCGGCTACG ATCGCCGCTT CATCTCCTAC
GCGACTTATG CGGATCTGGC CCAGGCCGAC AGCCAGATGC CCTACAAGCA GACCTTCCTC
GATCCGCATT CGGACCTCGA CAACTATGGC GCGGCGCTGA CCATCGACGT CGACCTGTCG
GATGCGCTGA AGTTCAAGTC GATCACCTCC TGGCGCAAGT ATGAAGCCGA CTGGTCCTAT
GACTCCGACG GTTCGCCCAT CGCCAACAAC CTGCTGAACC AGAACCAGCG CAACCGGCAG
TGGAGTCAGG AACTGCGGCT TTCGGGCAAG GTTCTCGACG ATGCGCTCGA TTTCACTGTC
GGCGGCTTCT ACTTCGACGC GCGCGGCACC TTCACCGGGC GTATCAACCT CAACTATGCC
GGCATCGATT TCCGCCACGG TCCCGATCCG ACGCCTGCCA AGAACAAGGC GCTGTTCGCC
AACGCTACCT GGCACATCAC CGATGCTGCG AACCTTACCG GCGGCATCCG TCAGTCGTGG
GACGAGAAGG ACTACGTCTA CGTCCGCAAG AATCCCGACG GGACCGACAT CGAGGGACCG
TGCAACTTCT TCCTCGGTGC CGCCACCGCA GGTCCAACGG GCATCGGCAA CCAGCCGAAC
TGCCTGCTCT TTGGGCTTGA CGGGTTGACC GCGAAGTTCC GCGACAATCG CATCGACTGG
CGCATCGCGG CCGACTATCG CTTCAGCCCC GAGTTCCTGT TCTATGCGCA GGTCTCGACC
GGCTACCGCG CCGGCGGCGT CAATCCGCGT CCGTTCTATG CAAGCCAGGC AACCGCCTTC
AAGCCGGAGA CGATCACCGC CTATGAAGCG GGCTTCAAGT CGGACCTGTT CGGCCGCAAG
CTGCGCCTCA ATGTTTCGGC CTTCTTCAAC GACTACAAGA ACATCATCCT GTCGAGCGTG
AACTGCCTCG ATCTCGCCAC GGCGGGTCCG GGCGGCACTT CGCAGGCTAC CCCGTGCCTG
CGTCCGTCGA ATGTCGGTTC GGCCCACGTC AAGGGCTTCG AGGTCGAGAC CCTGATCCGC
CCGATCGACA ACTTCACCAT CGACGGCTCG CTCAGCTACC TCGACTTCAA GTACCAGAGC
GTCGACACCG CCTCGACCGG GGTGACCAAG GACGATGTCA CGCCCTACAC GCCCAAATGG
AAGGCCGCGT TCGGCGTGCA GTACGACTTC CAGGACGTTC TCAAGGGCAC TGTCACGGTG
CGCTTCGACG GTGCCTACCA GTCGAAGATC TACACCGAGG CCGCTAACAT CGACAGCGTT
TCGGTCAGCA GCACCGTCGC TGCCGGGACG GGTGGCTTCA GCAATGCCGG TGGCGGCGGG
TCGATCACCA CGCTGCGCCT GTCAAACCGC ATCGACGGAT ACTTCCTCGC CAACGCGCGG
GTAGGCTGGC AGTCGGAAGA CAAGGACTGG GGCCTCACCT TTGAAGTCCA GAACCTGACC
AACAAGTACT ACTTCACGAC GCTCCTCCAG GAAGCGTTCG GTGCGGGCAC CGCCTCGGGC
GCCCCGGGCC GCCCGCGCAC CTGGTCGGTC ACCGCGCGTC GTTCGTTCTG A
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| Protein sequence | MMKLLAAGAS LLALSLSTQA FAQDAAQAED KSPNIEEIVV TAQFRAQNLQ DTPLAITAVS
GELLAQRGQT NVSEIAAQSP NVTLKPQGQE LGPGIIAFIR GVGQTDPNFA LEPGVGMYID
DVYLPTLTGS LLDLTDLDRV EVLRGPQGTL AGRNSLGGSI KLYSKKPEGS NTGSVEVTYG
RYNRLDARGL FDVKLSNNLF MRVAGVTKNV DGYVKRLDYN LTHPGTNVPT LAKGSNPVLG
TLGGQSYAAG KVSLRWQPTE TIDINLTGDY TRERNEPGAN VLLFANTSAT FDGPNAAGTG
GRPFLAGTDG VGIPLNCAFV PNGANSCDTI SGYDRRFISY ATYADLAQAD SQMPYKQTFL
DPHSDLDNYG AALTIDVDLS DALKFKSITS WRKYEADWSY DSDGSPIANN LLNQNQRNRQ
WSQELRLSGK VLDDALDFTV GGFYFDARGT FTGRINLNYA GIDFRHGPDP TPAKNKALFA
NATWHITDAA NLTGGIRQSW DEKDYVYVRK NPDGTDIEGP CNFFLGAATA GPTGIGNQPN
CLLFGLDGLT AKFRDNRIDW RIAADYRFSP EFLFYAQVST GYRAGGVNPR PFYASQATAF
KPETITAYEA GFKSDLFGRK LRLNVSAFFN DYKNIILSSV NCLDLATAGP GGTSQATPCL
RPSNVGSAHV KGFEVETLIR PIDNFTIDGS LSYLDFKYQS VDTASTGVTK DDVTPYTPKW
KAAFGVQYDF QDVLKGTVTV RFDGAYQSKI YTEAANIDSV SVSSTVAAGT GGFSNAGGGG
SITTLRLSNR IDGYFLANAR VGWQSEDKDW GLTFEVQNLT NKYYFTTLLQ EAFGAGTASG
APGRPRTWSV TARRSF
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