Gene Saro_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_4018 
Symbol 
ID5077548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp183328 
End bp184026 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640481123 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_001165785 
Protein GI146275624 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG ACGATGCACC AACCGACGAT CAGTCGATTG CGGATCGCCT CGGTTCGTTC 
GACACTTGCA CGATATCCGA TGCACTCGAT ACTCTTGGGC TAACGGGCGC CGTAATCGGT
CTGGCTCCGC TCACCATCCC TGGTCGTCGG ATTGCCGGAG AGGCCGTAAC CGTCAAGCTC
GGGCCGCCGC TTGCCGGATT GCCCAAACGC CACCTGTGCG CGGCCGCCGT GATGTCGGCC
CGCAATGGCG AAGTCATCGT GATAGAACAC CGTGGCCGGG CCGATGTTTC CGGATGGGGC
GGACTGCTCA GCAGAGGCGC GATCAAGTAC GGCCTGGCCG GGGTGATAAT CGATGGTGCC
TGCCGCGACG TCGACGAGAG CAGGGAACTG GGGCTGCCCA TTTTCGGGCG CAATGCGGTT
CCGGTAACTG CACGAGGCCG GATTGCGGAG CACGCCTGGG ATTGCCCGGT CACGATCGGG
ACCGTGGTCG TCAAACCGGG TGACTGGGTT GTCGCGGATG GCAGCGGAGT GGTTTTCGTC
GATCCGAACC GTCTGAATGA CGTCCTGCGG GAAGCTGAGA GGATCAGCGC ACGCGAAGCG
GCGATGGCGC TGGCGATCGA AGCGGGTTCG CCACTCGATC AAGTCCTTGG GGCTAATTAC
GAAGACTTGC TGAACGGTGC GGAGAGCAAT CATGGATGA
 
Protein sequence
MSEDDAPTDD QSIADRLGSF DTCTISDALD TLGLTGAVIG LAPLTIPGRR IAGEAVTVKL 
GPPLAGLPKR HLCAAAVMSA RNGEVIVIEH RGRADVSGWG GLLSRGAIKY GLAGVIIDGA
CRDVDESREL GLPIFGRNAV PVTARGRIAE HAWDCPVTIG TVVVKPGDWV VADGSGVVFV
DPNRLNDVLR EAERISAREA AMALAIEAGS PLDQVLGANY EDLLNGAESN HG