Gene Saro_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3967 
Symbol 
ID5077497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp135547 
End bp136026 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID640481073 
ProductMucR family transcriptional regulator 
Protein accessionYP_001165735 
Protein GI146275574 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACG ACACCCTGCT GGACCACGTT GCCGACATCG TCTCCGCCCA TGTCAGCAAC 
AATTCGGTTT CGGCCAATGA TCTGCCGGGC CTGATCCAGT CGGTCTATAC TTCGCTTGCC
ACACTCGGCC AGGCTCCCGA GCCGCTCGAG GAAAAGCTCA CGCCTGCAGT CTCGGTCCGC
GCGTCGGTCA AGCCCGACGC CGTGACCTGT CTCGACTGCG GCGCGAAGAT GAAGATGCTC
AAGCGCCACC TCGGCACCGA CCATGGCATG ACCCCGGCTG AGTACCGCAC GCGCTGGAAC
CTGCCGGCAG ACTATCCGAT GGTCGCGCCG GAATATGCCG CCAAGCGCAA GGAACTCGCG
GTCCGGATCG GGCTCGGCCG CAAGCCCGGA CAGAAGCCGA AGGCCAAGGC TGAACCCGCA
AAGACGGCCA AGCCGCGCAA GAAACTTGGC GTTGCCTTTG GCGCTACCGA TGCCGGATAG
 
Protein sequence
MADDTLLDHV ADIVSAHVSN NSVSANDLPG LIQSVYTSLA TLGQAPEPLE EKLTPAVSVR 
ASVKPDAVTC LDCGAKMKML KRHLGTDHGM TPAEYRTRWN LPADYPMVAP EYAAKRKELA
VRIGLGRKPG QKPKAKAEPA KTAKPRKKLG VAFGATDAG