| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4588 |
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| Symbol | gidB |
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| ID | 5061078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5179671 |
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| End bp | 5180399 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476855 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001161394 |
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| Protein GI | 145597097 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.188204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000465387 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCGGGCG CGGTGAGCGC CACGCCGCCC CCGGAGTTGG CCACCGCGGC CCGTACGCTC
TTCGGTGATC GGCTGAGCCT GGCCGTCGCG TACGCGGGCC TGTTGGTGAC CGACGGGGTG
GTCCGGGGGC TCATCGGCCC GCGGGAGGCG CCGCGGATCT GGGATCGGCA TCTCCTCAAC
TGTGCGGCGG TGGCGGAGCG GATTCCGCTG GGTTCGACGG TGCTTGACGT GGGTAGCGGC
GCCGGACTGC CGGGACTTGT GCTCGCCGTC GCTCGGCCGG ATCTCTCGGT CACCCTGGTT
GAGCCGCTCG CCCGTCGTAC CGCCTTCCTC GTCGAGGCGG TGGCGCAGCT CGACCTGGCG
GCCTCGGTCC AGGTCGTCCG GGGCCGGGCA GAGGAGATCG CCTCCGGCGG GGGCGGCGTC
GAGCCACTCA CCGGCGATGT GGTGACCGCT CGGGCGGTGG CACCGCTGGA CCGGCTCGCC
CGGTGGTGCC TTCCGCTGGC GGTGCCGGGT GGGCGACTGG TCGCCCTGAA GGGCGCCTCG
GCTGTGGAGG AGGTCGCCGA GCATGCCGCC ATCGTGGACC GGCTTGGCGG CGGCAGGCCC
GAGGTACACC ACTGCGGTGC GGGCGTGGTC GAGCCACCGA CGACGGTGAT CGAGATTGCG
CGGGAGCGGG TGGTGGCACC GGCGCGGCCG AAGCCTGCGA AACGCTCCCG TGGTGGTCGG
CGGCGCTGA
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| Protein sequence | MPGAVSATPP PELATAARTL FGDRLSLAVA YAGLLVTDGV VRGLIGPREA PRIWDRHLLN
CAAVAERIPL GSTVLDVGSG AGLPGLVLAV ARPDLSVTLV EPLARRTAFL VEAVAQLDLA
ASVQVVRGRA EEIASGGGGV EPLTGDVVTA RAVAPLDRLA RWCLPLAVPG GRLVALKGAS
AVEEVAEHAA IVDRLGGGRP EVHHCGAGVV EPPTTVIEIA RERVVAPARP KPAKRSRGGR
RR
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