Gene Strop_4555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4555 
Symbol 
ID5061045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5142617 
End bp5143126 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID640476822 
Productsingle-strand binding protein 
Protein accessionYP_001161361 
Protein GI145597064 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.184905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.802331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAG ACACCATCAT CACGGTTATC GGTAATCTGA CCGATGACCC CGAGTTGCGA 
TTCACCCCCT CCGGTGCGGC GGTCGCCAAG TTCCGGGTCG CCTCGACGCC CCGGTTCTTC
GACAAGTCGT CCAGCGAGTG GAAGGACGGC GAGCCGTTGT TCCTCTCGTG CACCGTCTGG
CGGCAGGCCG CCGAGCACGT CGCGGAGTCG CTGCAGCGCG GCACCCGCGT GATCGTGTCC
GGTCGGCTGC GGCAGCGGTC GTACGAGACC CGCGAGGGTG AGAAGCGCAC GGTTATCGAG
CTGGAGGTCG ACGAGATCGG CCCGTCGCTG CGCTACGCCA CGGCGAAGGT GCAGAAGATG
TCCCGCTCGG GCGGTGGTGG TTTTGGCGGC GGTGGTGGCC AGGGCGGCGG AGGCAACTTC
GACGACCCGT GGGCCTCGGC CGCTCCTGCT CCCGCACCCT CGCGTGGCGG GTCCGGTGGT
GGCAACTTCG ACGAGGAGCC TCCGTTCTGA
 
Protein sequence
MAGDTIITVI GNLTDDPELR FTPSGAAVAK FRVASTPRFF DKSSSEWKDG EPLFLSCTVW 
RQAAEHVAES LQRGTRVIVS GRLRQRSYET REGEKRTVIE LEVDEIGPSL RYATAKVQKM
SRSGGGGFGG GGGQGGGGNF DDPWASAAPA PAPSRGGSGG GNFDEEPPF