| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4554 |
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| Symbol | rpsR |
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| ID | 5061044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5142336 |
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| End bp | 5142617 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640476821 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001161360 |
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| Protein GI | 145597063 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0362577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.782649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCCGA GCGCCCGCAA TCGCAAACCA GGAGCAAGGT CAATGGCCAA GGCTGCGGCA
CTTCGCAAGC CGAAGAAGAA AGTGAACCCG CTTGATAAGG ACGGGATCAC GTACATCGAT
TACAAGGACA CTGCGCTGCT GCGCAAGTTC ATCTCCGACC GCGGCAAGAT TCGTGCCCGG
CGAGTGACTG GCGTGACCTC GCAGCAGCAG CGGCAGATCG CCCGCGCGGT CAAGAACGCC
CGCGAGATGG CGCTCTTGCC GTACACGGCG ACGGCTCGCT GA
|
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| Protein sequence | MAPSARNRKP GARSMAKAAA LRKPKKKVNP LDKDGITYID YKDTALLRKF ISDRGKIRAR
RVTGVTSQQQ RQIARAVKNA REMALLPYTA TAR
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