Gene Strop_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4527 
Symbol 
ID5061017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5114840 
End bp5115646 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID640476794 
Producthypothetical protein 
Protein accessionYP_001161333 
Protein GI145597036 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCG ACCCGCGTGC CGTGCTCACC CGTCCCGCGC CGGCCCCGGA CGTCACCGTC 
GCCTACGGCC CCCATCTGGA CCAGGTCGCG GATCTGCGCC GGCCAACCGG CGCCGGACCG
GCCCAGCGAC TGGTGATCGT CGTGCACGGC GGCTTCTGGC GGGCGGAGTA CGACCGCCGG
CACACCGCAC CACTGGCGAC CGCGCTGGCC CGGCTCGGCT ACCCGGTGGC ACAGATCGAG
TACCGCCGGA CCGGGCAGCC CGGCGGTGGC TGGCCGGGGA CAATGGCCGA CATCCTGACC
GGGGTGTCCG AGCTGCCCCG GCTGACGGCC GAGGCGTTCC CCGGCGCGAT GGCGGCCGGC
CCGCCGATCC TCATCGGTCA CTCGGCCGGT GGGCAGCTGG CACTCTACGC TGCCGCTACC
CTGCCCGCCG TGGTCGGTGA GGTCCTCGCC CTGGCCCCGG TGGCGAACCT GGCCGAGGCC
TACCGGCTGG ACCTGGACAC GGGTGCGGTG GCCGCACTGC TCGGCGGCGG CCCGACCGAG
GTGCCGGACC GCTACACGGC CTGTGATCCG CGTTCGTTGC CGCCATCCAA ATCACGGACA
GTAGTTATGC ACGGTGTCCT CGACCAGCAG GTGCCCATCA CGATGAGCCG GGAGTTCGTC
GCGGCCAGGC GCGCCACCGG CGGCAACGTC CACCTCCTCG AGCTCACCAA TTGCGAGCAT
TTTGGCCTTA TCGACCCAGA GTCAACGGCT TGGCCGGAGG TCGTCCTCGC GTTACGGTCC
CTCACCGGGA CTTCGCCGGT AAGTTGA
 
Protein sequence
MSSDPRAVLT RPAPAPDVTV AYGPHLDQVA DLRRPTGAGP AQRLVIVVHG GFWRAEYDRR 
HTAPLATALA RLGYPVAQIE YRRTGQPGGG WPGTMADILT GVSELPRLTA EAFPGAMAAG
PPILIGHSAG GQLALYAAAT LPAVVGEVLA LAPVANLAEA YRLDLDTGAV AALLGGGPTE
VPDRYTACDP RSLPPSKSRT VVMHGVLDQQ VPITMSREFV AARRATGGNV HLLELTNCEH
FGLIDPESTA WPEVVLALRS LTGTSPVS