Gene Strop_4508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4508 
Symbol 
ID5060998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5097452 
End bp5099125 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content68% 
IMG OID640476775 
ProductSSS family solute/sodium (Na+) symporter 
Protein accessionYP_001161314 
Protein GI145597017 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG TCCTCGCGGC TGAGGCGGGC GACAGCACCG CCCGGAACCT GACCCTCACG 
CTCTTTCTCG TCTTCGTGGC GGTGACGCTG GCGATCACGG TGTGGGCCAG CCGGCAGACC
AAGACCGCCA CCGACTTCTA CGCGGGTGGC CGCTCCTTCT CCGGCTTCCA GAACGGCATG
GCGATCGGCG GCGACTACAT GTCGGCGGCG TCGTTCCTCG GCATCGCCGG CCTCATCGCC
CTCTACGGCT ACGACGGCTT CCTCTACTCG ATCGGCTTCC TGGTCGCCTG GCTGGTGGCG
CTGCTGCTCG TCGCCGAGCT GCTCCGCAAC TCCGGCCGCT ACACGATGGC CGACGTGCTC
GCCTTCCGGA TGCGGCAGCG TCCGGTGCGG ACGGCCGCCG CGGCCTCCAC CATCACGGTG
TCGATCTTCT ACCTACTCGC CCAGATGGTC GGTGCGGGGG CGCTGGTCGC CCTGCTGCTC
GGCATCAAGC CAGGCACGAC CTTCCTCGGC CTGGACGCGG ACGCCGCCAA GATCGCAACG
ATCATCATGG TCGGTGCGCT GATGGTCACC TACGTGACGG TGGGTGGCAT GAAGGGCACC
ACCTATGTGC AGATTGTCAA GGCGTTCCTG CTGATGGGCG GCGCCGTCGT GATGACCCTG
CTGGTGTTGG CGAAGTACAA GTTCAACCTC TCCGGCCTGC TCGGTGACGC GGCGGACGCC
TCCGGCAAGG GCGCCGCCTT CCTCGAACCG GGGCTGCGCT ACGGCGTCGA GACACCCGGC
GACGCCTTGA AAACCTTCTA CAGCAAGCTG GATCTGCTCT CTCTCGGCGT CGCACTGGTG
CTGGGCACGG CCGGTCTGCC GCACATCCTC ATCCGCTTCT ACACCGTGCC CACGGCGAAG
GCCGCCCGGA AGAGTGTCCT CTGGGCAATC GGCATCATCG GCACCTTCTA CCTACTCACG
CTCGCCCTCG GCTTCGGCGC CGCGGCGCTG GTGGGAAGCG AGGCGATCAC CGCGCAGGAC
CGGGCGGGGA ACACCGCCGC GCCGCAGCTG GCCGAGGCGT TGGGGGTGGA CTTCCTCGGT
GGAGAACTGG GCGGCGCGAC GCTACTGGCG GTCATCGCGG CGGTTGCCTT CGCGACCATC
CTGGCGGTCG TCGCCGGCCT GACCCTGGCC TCCTCGTCCA GCCTGGCGCA CGACTTCTAC
GCCAACGTGG TCAAGAACGG CACGGCGTCC GAGCGGCAGG AGGTTGCCGT GGCGCGGATC
TCCGCCCTGG TGATCGGCGC GATCTCGATC GTTCTCTCCA TCTTCGCGCA GAACCTGAAC
GTCGCCTTCC TGGTCGCCCT CGCCTTCGCG GTGGCCGCGT CGGGCAACCT GCCGGCGATC
CTCTACAGCC TCTTCTGGCG GCGGTTCAAC ACCAGCGGCG CAGTCTGGGC CATCTACGGC
GGCCTCTTCG CCGCGGTCTT TCTGGTGTTC TTCTCCCCGG TCGTCTCCGG GTCGCCGACC
GCGATGTTCC CCGACCAGGA CTGGCAGTGG TTCCCGCTGT CCAACCCGGG CCTGCTCTCC
ATCCCGTTCG GCTTCCTCTG CGGCTGGTTC GGGACGGTGA TCTCCAAGGA ACGCGACGAT
CAGCGCTACG CCGAGTTGGA GGTTCGCTCC CTCACCGGCG CGGGCGCGCA CTGA
 
Protein sequence
MTTVLAAEAG DSTARNLTLT LFLVFVAVTL AITVWASRQT KTATDFYAGG RSFSGFQNGM 
AIGGDYMSAA SFLGIAGLIA LYGYDGFLYS IGFLVAWLVA LLLVAELLRN SGRYTMADVL
AFRMRQRPVR TAAAASTITV SIFYLLAQMV GAGALVALLL GIKPGTTFLG LDADAAKIAT
IIMVGALMVT YVTVGGMKGT TYVQIVKAFL LMGGAVVMTL LVLAKYKFNL SGLLGDAADA
SGKGAAFLEP GLRYGVETPG DALKTFYSKL DLLSLGVALV LGTAGLPHIL IRFYTVPTAK
AARKSVLWAI GIIGTFYLLT LALGFGAAAL VGSEAITAQD RAGNTAAPQL AEALGVDFLG
GELGGATLLA VIAAVAFATI LAVVAGLTLA SSSSLAHDFY ANVVKNGTAS ERQEVAVARI
SALVIGAISI VLSIFAQNLN VAFLVALAFA VAASGNLPAI LYSLFWRRFN TSGAVWAIYG
GLFAAVFLVF FSPVVSGSPT AMFPDQDWQW FPLSNPGLLS IPFGFLCGWF GTVISKERDD
QRYAELEVRS LTGAGAH