Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4508 |
Symbol | |
ID | 5060998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 5097452 |
End bp | 5099125 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640476775 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_001161314 |
Protein GI | 145597017 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG TCCTCGCGGC TGAGGCGGGC GACAGCACCG CCCGGAACCT GACCCTCACG CTCTTTCTCG TCTTCGTGGC GGTGACGCTG GCGATCACGG TGTGGGCCAG CCGGCAGACC AAGACCGCCA CCGACTTCTA CGCGGGTGGC CGCTCCTTCT CCGGCTTCCA GAACGGCATG GCGATCGGCG GCGACTACAT GTCGGCGGCG TCGTTCCTCG GCATCGCCGG CCTCATCGCC CTCTACGGCT ACGACGGCTT CCTCTACTCG ATCGGCTTCC TGGTCGCCTG GCTGGTGGCG CTGCTGCTCG TCGCCGAGCT GCTCCGCAAC TCCGGCCGCT ACACGATGGC CGACGTGCTC GCCTTCCGGA TGCGGCAGCG TCCGGTGCGG ACGGCCGCCG CGGCCTCCAC CATCACGGTG TCGATCTTCT ACCTACTCGC CCAGATGGTC GGTGCGGGGG CGCTGGTCGC CCTGCTGCTC GGCATCAAGC CAGGCACGAC CTTCCTCGGC CTGGACGCGG ACGCCGCCAA GATCGCAACG ATCATCATGG TCGGTGCGCT GATGGTCACC TACGTGACGG TGGGTGGCAT GAAGGGCACC ACCTATGTGC AGATTGTCAA GGCGTTCCTG CTGATGGGCG GCGCCGTCGT GATGACCCTG CTGGTGTTGG CGAAGTACAA GTTCAACCTC TCCGGCCTGC TCGGTGACGC GGCGGACGCC TCCGGCAAGG GCGCCGCCTT CCTCGAACCG GGGCTGCGCT ACGGCGTCGA GACACCCGGC GACGCCTTGA AAACCTTCTA CAGCAAGCTG GATCTGCTCT CTCTCGGCGT CGCACTGGTG CTGGGCACGG CCGGTCTGCC GCACATCCTC ATCCGCTTCT ACACCGTGCC CACGGCGAAG GCCGCCCGGA AGAGTGTCCT CTGGGCAATC GGCATCATCG GCACCTTCTA CCTACTCACG CTCGCCCTCG GCTTCGGCGC CGCGGCGCTG GTGGGAAGCG AGGCGATCAC CGCGCAGGAC CGGGCGGGGA ACACCGCCGC GCCGCAGCTG GCCGAGGCGT TGGGGGTGGA CTTCCTCGGT GGAGAACTGG GCGGCGCGAC GCTACTGGCG GTCATCGCGG CGGTTGCCTT CGCGACCATC CTGGCGGTCG TCGCCGGCCT GACCCTGGCC TCCTCGTCCA GCCTGGCGCA CGACTTCTAC GCCAACGTGG TCAAGAACGG CACGGCGTCC GAGCGGCAGG AGGTTGCCGT GGCGCGGATC TCCGCCCTGG TGATCGGCGC GATCTCGATC GTTCTCTCCA TCTTCGCGCA GAACCTGAAC GTCGCCTTCC TGGTCGCCCT CGCCTTCGCG GTGGCCGCGT CGGGCAACCT GCCGGCGATC CTCTACAGCC TCTTCTGGCG GCGGTTCAAC ACCAGCGGCG CAGTCTGGGC CATCTACGGC GGCCTCTTCG CCGCGGTCTT TCTGGTGTTC TTCTCCCCGG TCGTCTCCGG GTCGCCGACC GCGATGTTCC CCGACCAGGA CTGGCAGTGG TTCCCGCTGT CCAACCCGGG CCTGCTCTCC ATCCCGTTCG GCTTCCTCTG CGGCTGGTTC GGGACGGTGA TCTCCAAGGA ACGCGACGAT CAGCGCTACG CCGAGTTGGA GGTTCGCTCC CTCACCGGCG CGGGCGCGCA CTGA
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Protein sequence | MTTVLAAEAG DSTARNLTLT LFLVFVAVTL AITVWASRQT KTATDFYAGG RSFSGFQNGM AIGGDYMSAA SFLGIAGLIA LYGYDGFLYS IGFLVAWLVA LLLVAELLRN SGRYTMADVL AFRMRQRPVR TAAAASTITV SIFYLLAQMV GAGALVALLL GIKPGTTFLG LDADAAKIAT IIMVGALMVT YVTVGGMKGT TYVQIVKAFL LMGGAVVMTL LVLAKYKFNL SGLLGDAADA SGKGAAFLEP GLRYGVETPG DALKTFYSKL DLLSLGVALV LGTAGLPHIL IRFYTVPTAK AARKSVLWAI GIIGTFYLLT LALGFGAAAL VGSEAITAQD RAGNTAAPQL AEALGVDFLG GELGGATLLA VIAAVAFATI LAVVAGLTLA SSSSLAHDFY ANVVKNGTAS ERQEVAVARI SALVIGAISI VLSIFAQNLN VAFLVALAFA VAASGNLPAI LYSLFWRRFN TSGAVWAIYG GLFAAVFLVF FSPVVSGSPT AMFPDQDWQW FPLSNPGLLS IPFGFLCGWF GTVISKERDD QRYAELEVRS LTGAGAH
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