Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4497 |
Symbol | |
ID | 5060987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 5087122 |
End bp | 5088762 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640476764 |
Product | Na+/solute symporter |
Protein accession | YP_001161303 |
Protein GI | 145597006 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.108837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.145875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCAACG GCTACGTCGT TCCGGCGATC GTCGCAGTCA CCCTGCTCAC CATCGGGATC GGCTTCTACG GTCTGCGGCT CGCCCGCACC ACCTCGGACT TTCTGGTGGC ATCCCGGGCC GTCAGCCCGA CCTGGAACGC CGCCGCGATC GGCGGGGAGT ACCTGTCGGC CGCGAGCTTC CTCGGCGTCG CCGGTCTGAT CCTCAAATTC GGGGTCGACA TGCTCTGGTA CCCGGTCGGC TTCGCCGCCG GCTACCTGGC TCTGCTGCTC TTCGTCGCCG CGCCGCTACG CCGCTCCGGG GCGTTCACCC TCCCCGACTT CTGTGAGCTG CGGCTGGGCT CCCGGCGGCT CCGCACCCTC GCCACCATCT TCGTGATCTT CATTGGTTGG CTCTACCTCG TCCCGCAGCT ACACGGAGCC GGGCTGACCC TGGCCACCCT GACCGGCTCC CCCTACCCGG CGGGCGCCCT CCTGGTCGCG GCGGTGGTCA CCGCGAACGT GGCGCTCGGC GGCATGCGTG CGATCACCTT CGTCCAGGCG TTCCAGTACT GGCTCAAGCT GACCGCCCTC GCCGTACCGG CGATCTTCCT GGTGTTGCAG TGGCAGGCCG ACGCCCGCCC GGCCATCACC CCACCCGAGG GTCCGACCTT CCGCACCGCG ACCACCGTCG TGGTCGAACA TCCCGCCACC CTCACCCTGC CCGACGGTCA GCTGGAGGAG GTACGCCCCG GCGACGAGCT AACCTTTGCG GCCGGGCAAC CGGTGCCCGC GGTGATCGGG ACCGCCACCG ACGCGGCCGA CTGGTTGCTG CCCAGCACCG CCGGGACCGA CGACCGGGGC CTGTTCACCA CCTACTCGCT GATCCTCGCC ACGTTCCTCG GCACCATGGG CCTGCCGCAC GTGCTGGTGC GCTTCTACAC CAACCCGGAC GGCGCCGCCG CCCGCCGCAC CACCCTGGTG GTGTTGGCCC TGGTCGGCGC CTTCTATCTG CTGCCGACCC TCTACGGGGC ACTCGGCCGG ATCTACACCC CACACCTGCT GCTCACCGGG GAGACCGACG CGGTGGTGCT GCTCCTGCCC AACGCGGCGC TGGGTGACGG CACCACCGGC CGGCTCCTCG CGGCACTGGT CGCCGCCGGG GCCTTCGCGG CATTCCTCTC CACCTCCTCC GGCCTGCTCA CCAGCGTTGC CGGAGTGGTC TCCACAGACG TGCTGCGACG CGGCTCGGTA CGCGGGTTCC GACTCGCCAC CGTGCTCGCC GCCGGCGCGC CCACGGTGCT CGCGCTCAAC GTCTCCGGGC TGGAGGTGTC ACAGGTGGTG GGGCTGGCGT TCGCGGTGGC CGCGTCGAGC TTCTGCCCCC TGTTGGTGCT GGGCATCTGG TGGCGGGGAC TGACCGACCG CGGCGCCGCC GCCGGAGTGC TTGTCGGCGG CGGCGCCGCG GTCGGGGCGG TGTTGGTGAC CGTGCTCGGC CCACCGCTGA CCGGGTGGCC GGCCACGCTC GTCGCGCAGC CAGCCGCCTG GACGGTCCCG CTCGCCTTCA CCGTCATGGT GGCGGTGTCG ATCGCCACCC ACCGCCGCGT CCCGACTGAT GTCGGCGTCA CGATGCTCCG CCTGCACGCA CCCGAAGCCC TCCGGCCGTA G
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Protein sequence | MGNGYVVPAI VAVTLLTIGI GFYGLRLART TSDFLVASRA VSPTWNAAAI GGEYLSAASF LGVAGLILKF GVDMLWYPVG FAAGYLALLL FVAAPLRRSG AFTLPDFCEL RLGSRRLRTL ATIFVIFIGW LYLVPQLHGA GLTLATLTGS PYPAGALLVA AVVTANVALG GMRAITFVQA FQYWLKLTAL AVPAIFLVLQ WQADARPAIT PPEGPTFRTA TTVVVEHPAT LTLPDGQLEE VRPGDELTFA AGQPVPAVIG TATDAADWLL PSTAGTDDRG LFTTYSLILA TFLGTMGLPH VLVRFYTNPD GAAARRTTLV VLALVGAFYL LPTLYGALGR IYTPHLLLTG ETDAVVLLLP NAALGDGTTG RLLAALVAAG AFAAFLSTSS GLLTSVAGVV STDVLRRGSV RGFRLATVLA AGAPTVLALN VSGLEVSQVV GLAFAVAASS FCPLLVLGIW WRGLTDRGAA AGVLVGGGAA VGAVLVTVLG PPLTGWPATL VAQPAAWTVP LAFTVMVAVS IATHRRVPTD VGVTMLRLHA PEALRP
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