Gene Strop_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4496 
Symbol 
ID5060986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5086744 
End bp5087121 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content73% 
IMG OID640476763 
Producthypothetical protein 
Protein accessionYP_001161302 
Protein GI145597005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0019823 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.109198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCCG CCGATGACCG CGTTCCCGCG CGGACCCGCA TCGTGCTGGC CGATGTGGTC 
CGCCGCGAGC ATCCCCGCAC CGAGCTCGCC CAGCAGACCC GGGTCGGCGA GGCGCTGGTG
CACGGCCTCG TCCGGGCGCA GCTCTCCCTG GCGTTGCGGC TCTGGCTGGT GGTGGCCATC
GGGCTGGGCG GCCTGCCGTG GCTGTTCGCC ATCGCGCCGT CGGTCAGCCG GGTCACCGTG
CTCGGGGTTG CCCTGCCGTG GGTGCTGCTC GGAGTGCTCT CCTTCCCGTT CCTGGTCACG
GTCGGCTGGG CGTACGTGCG GCTGGCCGAG CGCAACGAAC AGGACTTCAC CGACCTGATC
CAGCGGCCGG AGCGCTGA
 
Protein sequence
MVAADDRVPA RTRIVLADVV RREHPRTELA QQTRVGEALV HGLVRAQLSL ALRLWLVVAI 
GLGGLPWLFA IAPSVSRVTV LGVALPWVLL GVLSFPFLVT VGWAYVRLAE RNEQDFTDLI
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