Gene Strop_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4480 
Symbol 
ID5060970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5071215 
End bp5071658 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content74% 
IMG OID640476747 
Producthypothetical protein 
Protein accessionYP_001161286 
Protein GI145596989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0231829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGCG ACATGGATAC GACATCGCCC GGGTCCCGGC AGTGGCGGGT CCCGGCCGCC 
CTGCCGGCGG TCAAGGTCGG TGGGGCCGGG GCGCTGGTCG CGCTCGGTCT TCTCCTCGCC
GACGGTGACC CGACTCGACT CGTGCTGGCC GGGCTGGCCG CCGCCGCGCT CCTCGGCTGG
GCCACGCGGG ATGTGCTGGT GCCGGTCCGC CTCGCGGTCG ATCCAGAAGG ACTGACGGTG
GTCAGCGGCT TCGCGGGCCG TCGGCGACTG CCGTGGTCGC AGGTGGCGGA GATCCGGGTG
GACCAGCGAA CCCGGCTCGG CCGGTCGAAC GCTGCCCTGG AGGTGGATGC CGGGGAGACA
CTGCACCTGT TCGGTCGGTT CGACCTGGAC GCTGACCCGG TCGAGGTCGC GGCGGAGCTA
CGGGAGGCCC GCCCGACCCG GTAG
 
Protein sequence
MLGDMDTTSP GSRQWRVPAA LPAVKVGGAG ALVALGLLLA DGDPTRLVLA GLAAAALLGW 
ATRDVLVPVR LAVDPEGLTV VSGFAGRRRL PWSQVAEIRV DQRTRLGRSN AALEVDAGET
LHLFGRFDLD ADPVEVAAEL REARPTR