| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4471 |
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| Symbol | |
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| ID | 5060961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5063495 |
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| End bp | 5063932 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476738 |
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| Product | redox-sensitive transcriptional activator SoxR |
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| Protein accession | YP_001161277 |
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| Protein GI | 145596980 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00882257 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGGAGT CATTAACCAT CGGTCAGCTC GCCGCGCGCA GCGGGGTGGC GTCCTCCGCG
CTGCGCTACT ACGAGCAGAT CGGGCTGCTC CGAGCCGACC GCACCAGCGG CAACCAGCGC
CGGTACGCGC GCAGCGAGTT GCGCCGGGTG GCGTTCATCC GGATCTCCCA ACAGGTCGGC
ATCTCGCTGG ACGAGATCCG GGAGGCGCTC GAGTCCCTGC CGGCCGCCCG GACCCCGACC
CCGGAGGACT GGACCCAGCT CTCCAAGCTG TGGCGGAACC GGCTGGACGA GAAGATCACG
CTCCTGACCC GGCTCCGGGA CGACCTCGAC GGGTGCATCG GCTGCGGGTG CCTGTCGTTG
CGCCGCTGCA CCCTCAGCAA CCCGGGCGAC CAGGTCGCCG ACGAGGGCCC CGGTGCGCGC
CTGGCGGTGC GGCGTTAG
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| Protein sequence | MQESLTIGQL AARSGVASSA LRYYEQIGLL RADRTSGNQR RYARSELRRV AFIRISQQVG
ISLDEIREAL ESLPAARTPT PEDWTQLSKL WRNRLDEKIT LLTRLRDDLD GCIGCGCLSL
RRCTLSNPGD QVADEGPGAR LAVRR
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