Gene Strop_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4446 
Symbol 
ID5060935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5043058 
End bp5043747 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID640476712 
Producthypothetical protein 
Protein accessionYP_001161252 
Protein GI145596955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.25718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAGC CCTCCTCGCC CCCGTTCCAC GTGGGCCTCA CACCCGCGCG GATCATCGAC 
GTCGCCGTGG ATCTCACCCG CGATTCCCAC CTGTTCGGCT GGTCGATCCG AGACCTCGCG
GGACGGCTCG ACGTCGCGCC ATCGGTCATC TACCACCACA TCGGCGGCAA GGATCGGATA
GCCCGTCATG TCGTTGAGCG TGTGCTCGAG CCACTGGCAC CACCGCCTGC CAGCCCTGAC
TGGCAGGCAT GGTTCCGCGA GCTACTCAAC TCCATCTACC CTGCCGTCTC CGCGCATCCC
GGCGTCGCCA AGTGGCTGCT CATGCACGGG CCGACCATCC CCTCGGTCAT TCCCGTCGTC
GACACCGGGA TCAGCGTCCT GCAACACGCC GGGTTCGGTG ACCGCGCCGG CCTGGCCTAC
GCCGCGCTGC TCAACAACGC CATGCTCAGC GTCTCGATCG GGGACGAACG CCTCATCCAC
GAGGACGATG GCCCACGCGA CCATGCCGCG ATGATGGAGG AGTTTCGCCT GGCCACTACC
GACAGCCCGG GCGTCGCTGT GCTGACAGAG GTGCTCATCA CCCCATTTGT CGAGAGCGAC
AGCGCCGCCA CACACAACCG CGAGAGCTAC TACCGTTTCG TCAACGACAT CACCATCGCG
GGACTAGCCG TCATGCTCAC CGGGGCCTGA
 
Protein sequence
MPKPSSPPFH VGLTPARIID VAVDLTRDSH LFGWSIRDLA GRLDVAPSVI YHHIGGKDRI 
ARHVVERVLE PLAPPPASPD WQAWFRELLN SIYPAVSAHP GVAKWLLMHG PTIPSVIPVV
DTGISVLQHA GFGDRAGLAY AALLNNAMLS VSIGDERLIH EDDGPRDHAA MMEEFRLATT
DSPGVAVLTE VLITPFVESD SAATHNRESY YRFVNDITIA GLAVMLTGA