| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4388 |
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| Symbol | |
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| ID | 5060874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4964049 |
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| End bp | 4966778 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476651 |
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| Product | ribonucleoside-diphosphate reductase, alpha subunit |
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| Protein accession | YP_001161194 |
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| Protein GI | 145596897 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.370714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.249939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGTCC GGGACTGCCC CGCAGCGGTG AGTGGGAACG ACCGCCGTCA TCACGCACTG
GGCTCATCGA GGCCTGGGAA GCGACGGCCA GTAGGCGACC GGGTCTCCCG GGCGTGCCCG
CGAGTCCGAA GACCTGCCAG CGCGCCGCAC GCGTCGTGTG CGGCGGTCGG AGGCCGCGCG
GGAGGGCCGA CGCCGTCAGC CGTCCGGTGT GATCGCTCCG CCGGGCGCCG ATTGTGGCGT
CCCCCGTGCG TTCGTCGACC TCGTCGACAG GCGGAGGAGG GGGAGATGAC GGTGACGCGG
GAACGCGCCA CGAACGGTCC GGCCGGAGCG GAGCAGCGGC GGCAGGTGAT GGGGGTCCGC
AAGCGCAACG GCGACACCGA GCCGGTGGAC GTCAACAAGA TCGTCCGGGC GGTGGAGCGG
TGGGTCGCCG ACCTGGACGA GGTGGACCCG CTGCGGGTGG CGACCAAGAC AATCAGCGGC
CTGTACGACG GGGCGACGAC GGCCGAGCTG GACCGATTGT CGATCCAGAC GGCGGCGGAG
CTGATCGGCG AGGAGCCGCA GTACTCGAAA CTCGCGGCGC GGCTGTTGGC CGCGTACGTG
GACAAGGAGG TCCGTGGCCA GCAGGTGGCC AGTTTCAGCC AGTCCATCCG GTACGCCCAC
GGCCTTGGCC TGATCAGCGA CGAGACCGCT GCCTTCGTGT CCCGCAACGC CCGCAAGCTG
GACGACGCGG TGGACCCCGC CGGCGACCTG CGGTTTGAGT ACTTCGGGCT GCGTACGGTC
GCGGACCGTT ACCTCCTGCG GCACCCGCAG TCGCGACTGG TGGTGGAGAC CCCGCAGTAC
TGGCTGCTGC GGGTGGCCTG TGGACTGTCA GGGACCCCGG CCGAGGCGAT CGGGTTCTAC
CGGTTGATGT CGTCGCTGGC ATACCTACCC AGCTCGCCGA CGCTGTTCAA CTCCGGCACC
CGGCACACCC AGATGTCGTC GTGCTTCCTG GTCGACTCGC CCCGCGACGA GCTGGACTCC
ATCTACCAGC GGTACCACCA GGTCGCGAAG CTGTCGAAGT TCTCCGGCGG CATCGGCATC
GCCTGGTCGC GGGTACGCGG CCGGGGCGCG CTGATCCGGG GGACGAACGG CCGGTCGAAC
GGCATCGTGC CGTTCCTCAA GACCCTCGAC GCCGGGGTCG CCGCGGTCAA CCAGGGAGGC
CGGCGCAAGG GCGCGGCCTG CGTCTACCTG GAGCCCTGGC ACCCCGACAT CGAGGAGTTC
CTGGAGCTGC GGGACAACAC CGGCGAGGAC GCCCGGCGTA CGCACAACCT GAACCTGGCC
AACTGGCTCC CGGACGAGTT CATGCGGCGG GTCGAGGCGG ACGGCGACTG GTCGCTGATC
GACCCGTCCG AGGCCCCGGA GCTGCCCGAC CTGTACGGCG AGGAGTTCGA CGCCGCCTAC
CGGGTCGCGG AGAAGAAGGC GGTCCGTACG GTCAAGGCCC GGGACCTGTA CGGGCGGATG
ATGCGCACCC TGGCGCAGAC CGGCAACGGG TGGATGACCT TCAAGGACCG CTCGAACACG
CTGTCCAACC AGACCGGGGA GCCCGGCAAC ACGATTCACC TGTCGAATCT CTGCACCGAG
ATTCTCGAGG TCAACAATGA CGCTGAGACC GCGGTGTGCA ACCTGGGCTC GGTCAACCTG
GGCGCCCACG TCACCGCCGA CGGGGTGGAC TGGGAGAAGC TGCGGGACAC CGTCCGCACC
GCGGTGGTGT TCCTCGACCG CGTGATCGAC ATCAACTACT ACCCGGCCGA GCAGGCGGCG
GCCTCGAACC CGCGCTGGCG GCCGGTCGGG CTCGGGCTGA TGGGCCTGCA GGACGCGTTC
TTCACGCTCC GGCTGCCGTT CGACTCGGCC GAGGCGAGCG AGCTCTCCAC CCGGGTGCAG
GAGGAGATCT TCCTGACCGC GTTGGAGACC TCCGCCGGGC TCGCCGAGCG GTTCGGCCCG
CATCCCGCGT ACGCGCAGAC CCGCGCGGCC CGGGGCGACC TGCACCCGGA GCTGTGGGGT
GCCGTGCCGA GCCAGCCGCA ACGGTGGGCC GGGCTGAAGG CACGGGTCGG GGAGCACGGT
CTGCGTAACT CGCTGCTGGT GGCGATCGCG CCGACGGCGA CGATCGCCTC GATCGCCGGC
TGCTACGAGT GCATCGAGCC GCAGGTGTCC AACCTGTTCA AGCGCGAGAC CATGTCCGGT
GAGTTCCTTC AGGTCAACAC GTACCTGGTC GGCGAGCTGA AGGCACGCGG GCTGTGGACG
GCATCGATCC GGGACCAGAT CAAGCGCGCG GAGGGGTCGG TACAGGGCCT CGCCGAGCTG
CCCGCCGAGG TGCGGGAGCT GTTTCGTACG GCGTGGGAGC TTCCGCAGCG GGCACTGATC
GACCTGGCCG CGGCCCGCGC CCCGTACATC GACCAGTCTC AGTCGTTGAA CCTGTTCCTG
GCCGCGCCGA CGATCGGCAA GCTCTCCTCG ATGTACCTGT ACGCCTGGAA GTCCGGGCTG
AAGACCACCT ACTACCTGCG GTCCCGTCCC GCGACGCGGA TCCAGCAGGC GACAGTCGCC
GTCACGTCGA CCGCCCAGCC GGGTGTCGCC GTCGCGTCGT CGGCCCAGCC GGGTGGTGCC
GCGTCGTCGA TCTCCGGTTT CGCCGGGACC GACGCCGAGG CGCTGGCCTG CTCCCTGGAA
AACCCCGAAA GCTGCGAGGC ATGTCAATGA
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| Protein sequence | MGVRDCPAAV SGNDRRHHAL GSSRPGKRRP VGDRVSRACP RVRRPASAPH ASCAAVGGRA
GGPTPSAVRC DRSAGRRLWR PPCVRRPRRQ AEEGEMTVTR ERATNGPAGA EQRRQVMGVR
KRNGDTEPVD VNKIVRAVER WVADLDEVDP LRVATKTISG LYDGATTAEL DRLSIQTAAE
LIGEEPQYSK LAARLLAAYV DKEVRGQQVA SFSQSIRYAH GLGLISDETA AFVSRNARKL
DDAVDPAGDL RFEYFGLRTV ADRYLLRHPQ SRLVVETPQY WLLRVACGLS GTPAEAIGFY
RLMSSLAYLP SSPTLFNSGT RHTQMSSCFL VDSPRDELDS IYQRYHQVAK LSKFSGGIGI
AWSRVRGRGA LIRGTNGRSN GIVPFLKTLD AGVAAVNQGG RRKGAACVYL EPWHPDIEEF
LELRDNTGED ARRTHNLNLA NWLPDEFMRR VEADGDWSLI DPSEAPELPD LYGEEFDAAY
RVAEKKAVRT VKARDLYGRM MRTLAQTGNG WMTFKDRSNT LSNQTGEPGN TIHLSNLCTE
ILEVNNDAET AVCNLGSVNL GAHVTADGVD WEKLRDTVRT AVVFLDRVID INYYPAEQAA
ASNPRWRPVG LGLMGLQDAF FTLRLPFDSA EASELSTRVQ EEIFLTALET SAGLAERFGP
HPAYAQTRAA RGDLHPELWG AVPSQPQRWA GLKARVGEHG LRNSLLVAIA PTATIASIAG
CYECIEPQVS NLFKRETMSG EFLQVNTYLV GELKARGLWT ASIRDQIKRA EGSVQGLAEL
PAEVRELFRT AWELPQRALI DLAAARAPYI DQSQSLNLFL AAPTIGKLSS MYLYAWKSGL
KTTYYLRSRP ATRIQQATVA VTSTAQPGVA VASSAQPGGA ASSISGFAGT DAEALACSLE
NPESCEACQ
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