Gene Strop_4384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4384 
Symbol 
ID5060870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4959803 
End bp4960645 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID640476647 
ProductABC transporter related 
Protein accessionYP_001161190 
Protein GI145596893 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.548465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAG ATGTTCAGCG GGCACCGGGG CAGATCCGGG AGCCGGCGAT CCAGGTGCGG 
GGCCTGCACA AGTCGTACCA GGAGCTGCGG GTGCTCCGCG GCGTCGACTT CGACGTCGCG
CGGGGAAGTG TCTTCGCCCT GCTCGGCTCA AACGGGGCGG GCAAGACCAC GGTGGTGCGG
ATCTTGTCTA CACTGCTCCG CTTGGATGCG GGATCGGCCA GCGTCAACGG CTTCGACGTC
GTCGCGCAGG CGGCGAAGGT GCGTGCGTCG ATCAGCCTGA CTGGGCAGTT CGCCGCGGTC
GACGAGGTCC TCAGCGGGCG GGAGAATCTG ATCCTGGTCG CCCGGCTGCG GCGACAGCGG
GAGCCGGGGC GGGTCGCGGA CGACCTGCTG GTCCGCTTCG CGCTCACGGA CGCGGCCAAC
CGGAGGGTGG CGACGTACTC GGGCGGGATG CGTCGTCGTC TCGACATCGC GATGAGTCTG
GTCGGGAACC CACCGGTGAT TGTCCTCGAC GAGCCGACGG TCGGGCTGGA CCCGCAGGCG
CGGCTGGAGG TGTGGCAAGC CGTTCGAGAA CTCGTCGCCC AGGGTACGAC GGTGCTGCTC
ACCACGCAGT ATCTCGACGA GGCCGAGCAG CTCGCGGACC GGATCGCGGT CCTGCACGAG
GGGCGCGTCA TCGCCAACGG CACGCTCACC GAGCTCCGGC GGCTGTTCCC GCCCGCCACC
GTGGAGTACG TCGAAAAGCA GCCGTCCCTG GAGGACATCT TCCTGGCCAT CGTCAGTGAC
GAGGGCACCA CCGTGACGAC AGCTTCAGCC CCGCCGGTAC GAGCAGCCAA GGACCCCCGA
TGA
 
Protein sequence
MSIDVQRAPG QIREPAIQVR GLHKSYQELR VLRGVDFDVA RGSVFALLGS NGAGKTTVVR 
ILSTLLRLDA GSASVNGFDV VAQAAKVRAS ISLTGQFAAV DEVLSGRENL ILVARLRRQR
EPGRVADDLL VRFALTDAAN RRVATYSGGM RRRLDIAMSL VGNPPVIVLD EPTVGLDPQA
RLEVWQAVRE LVAQGTTVLL TTQYLDEAEQ LADRIAVLHE GRVIANGTLT ELRRLFPPAT
VEYVEKQPSL EDIFLAIVSD EGTTVTTASA PPVRAAKDPR