Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4374 |
Symbol | |
ID | 5060860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4951026 |
End bp | 4952426 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640476637 |
Product | glutamate decarboxylase |
Protein accession | YP_001161180 |
Protein GI | 145596883 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.777962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACA CGCGGCGACC TGTGGATTCT GCCGAGGCGG ACGTGGTCGA AGTGAATCCG CTGTTCGCGC GTCCGGGTGA GTCGACCGAG CTTGCTCGAT TCTCGATTCC AGACTGTGAG TCACTGCCGG AAACCGCATA CCAGATCGTG CACGACGAGG TGGCGCTCGA CGGCAACGCG CGGCTGAACC TAGCGACTTT TGTCGGCACC TGGATGGACA GTCACGCCGA AAAGCTGTAC GCCGACACCT TCGACAAGAA TTTGATCGAC AAAGACGAAT ACAAGGCTAC GGACGCAATA GAGGAACGGT GTCGGATCAT CCTGGCGGAT CTCTGGCATG CGCCGGAACC CCGGAATACC ATCGGCGCGT CCACGATCGG TTCGTCTGAG GCGTGCATGC TGGGAGGGTT GGCGCTCAAG CGTCGCTGGC AGCATGCGCG TCGTAGTGTC GGAAAGTCGA GCGAACGTCC CAATCTGGTG ATGTCGAGCG CAGTGCAGGT GTGTTGGAAG AAGTTCTGTA GCTACTGGGA CGTGGAAGCG CGAATCGTGT CGATCTCCGA GGAGCGCAAG GTGCTCGACG GTCACGATCT TCGGTCGTAC GTGGACGAGA ACACGATCGG CGTCGTGGCG GTGTTTGGCG TGACATACAC CGGAATGTAT GAGCCGGTGG AGCGGATCGC GGCGGCGCTG GACGAGATCC AGGCTTCGAA AGGTCTGGAT ATCCCTATCC ATGTCGACGG AGCTACCGGC GCATTCGTGG CGCCCTTCAT TCAACCCCAC ATCACTTGGG ACTTTCGCAT CAGTAGGGTC GCGTCGATTA ATGTTTCGAG CCACAAGTAC GGGCTGGTCT ACCCGGGTCT GGGATGGATT GTTTGGCGGG ATCAGGCGGC GCTGCCCGAG GACCTGCGGT TCCGGGTGGC CTACCTGGGT GGCGAGACGC CGACTGTCGG GTTGAGTTTC ACCCGACCGG GGGCTCAGGT GTTACTGCAG TACTACTTGT TCCTGCGCCT CGGCCGGGAC GGCTATCAGC GGGTGCATCA GGCCACACAA GACGTGGCAC AGTACCTGTC CCGGGAGATC GCCAAAATGC CGCAGTTCGA GCTGTGGAGT GACGGCAGTG ACCTTCCGGT GCTGACGTGG CATCTTCGAA AGGGGCGTTC CTATAACTGG AACCAGTATC ATCTGTCCGA TCGATTGCGT ATGAAAGGGT GGCAGGTCCC CACGTACCCG ATGCCCGACG ACCTAACTCA CCTCACCGTT CAGCGGATCG TGGTCCGCGG CGGTCTCAGC CGCGACCTCG CCGGGGCGTT AGTCGCCGAT CTCCATGCAG AGGTAGGATT TCTCGAATCC CTAACTGCTC CTATCGAGGC TTTGGGTGAG CGACCCGGGT TCCATCACTG A
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Protein sequence | MSNTRRPVDS AEADVVEVNP LFARPGESTE LARFSIPDCE SLPETAYQIV HDEVALDGNA RLNLATFVGT WMDSHAEKLY ADTFDKNLID KDEYKATDAI EERCRIILAD LWHAPEPRNT IGASTIGSSE ACMLGGLALK RRWQHARRSV GKSSERPNLV MSSAVQVCWK KFCSYWDVEA RIVSISEERK VLDGHDLRSY VDENTIGVVA VFGVTYTGMY EPVERIAAAL DEIQASKGLD IPIHVDGATG AFVAPFIQPH ITWDFRISRV ASINVSSHKY GLVYPGLGWI VWRDQAALPE DLRFRVAYLG GETPTVGLSF TRPGAQVLLQ YYLFLRLGRD GYQRVHQATQ DVAQYLSREI AKMPQFELWS DGSDLPVLTW HLRKGRSYNW NQYHLSDRLR MKGWQVPTYP MPDDLTHLTV QRIVVRGGLS RDLAGALVAD LHAEVGFLES LTAPIEALGE RPGFHH
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