Gene Strop_4346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4346 
Symbol 
ID5060831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4922852 
End bp4926424 
Gene Length3573 bp 
Protein Length1190 aa 
Translation table11 
GC content75% 
IMG OID640476608 
Productadenylyl cyclase class-3/4/guanylyl cyclase 
Protein accessionYP_001161152 
Protein GI145596855 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTGCC CGGTGTGCGG AACCGTCGCG GTACCCGGTG CCCGGTTCTG CCACAACTGC 
GGCGCCGCGC TGCCGGCTGC GGCGACCCTC CCCGCCACCG AACGCCGGGT GGTCACCGTG
CTCTTCGGTG ACCTGTCCGA CTTCACCTCC TGGTCGGAGG ATCTCGACCC GGAACGGGTC
GGCGCCGTCA CTGACCGGGT GCTCGCGGCA CTGGCCGGCG CGGTCAAGAC CTTCGGCGGG
CACGTCGACA AGCTGACCGG TGACGGCATC ATGGCGGTCT TCGGCGCGCC GGTGGCGCAC
GAGGATGACG CCGAGCGAGC CGTTCGGGCG GCGCTGTCCA TGCAGCGGGC GGTGCGCCGG
GTCCTCGACG ACGAACGCGG CGGCGGGGGG CCGTTGGGCC TGCGGGTCGG TCTCAACACC
GGGGACGTGA TCGCCGGAAT CCAGGCGGCC CTCGAATACA CGGTCATCGG AGACACGGTC
AACACCGCCG CCCGGCTCGC CGACACGGCG GCGGTCGGCG CGGTCTACGC GGGGGACCGG
ACGGCCGCCG CGACCCGGCA CGTGGCCTCC TGGCGGGCGC TGCGCCCGCT GCGTCTGAAG
GGCAAGCGCG AGCCGGTCAC GGCGTACGAA CTACTCGGCC TGCTGGACGC CACGGGCACT
CGGTCCGGGC TCGGGGACGA GGCGCCCTTC GTCGGCCGGG AGACCGAGAT CGGGCGGGTG
GCGGGCCGGC TCGCCGAGGT GGTCGACCGC GGTGAGCCCC GGGTACTGCT GGTGACCGCC
GAGGCCGGCA TCGGCAAGTC CCGCTTCGCC ACCGAGGTGG AACGCCTCGC CGCCGGCTAC
GACGTGGGCG CCGGTCGGTT CGCGGCGTAC ACCGGCGCGC GGGTGCTCTC CGTCCGCTGC
GTCGCGTTCG GGGAGCGGCG CCGGCTCGCG CCCCTGGCGG ACCTGGTCCG CGCCGCGGTC
GGCCTGCCCA CCGATACGGC GACCGCGCTC ACCCGACCGG CGGTCGAGGA GCGGCTGCGT
CGGCTCGGCC AGCGCCTCGG CCGTACCGGT GGCGATCCGG TGCCGATCGC CACCGAGCAG
TTGCTGGCCC TGCTCGGGTA CGCGGAGCTG CCCAGCGGCC CCACCGACCA GGGTGAGTGG
CGCTCGGCGT GTCAGTCCGC CGACGGCGAC GCGGTGCCGA ACGCCGTCGC CGACCTGCTC
AGCGCCATCG CCGCGGAGGC GCCACTGGTG GTCGTGGTGG ACGATCTGCA CGACGCGACC
GCCGAGAGCA CCCATGCGCT CGGCGAGACC CTGTCCCGGA TCGTCGGCCC GGTGCTGGTG
TTGTTGCTGG GCCGGCCGGA GCTGGTCCGT ACGGCGGGTG CTCTGACCCA GGTGGCCGAC
GCCGAGGTCC ATGCGCTGCC GCCGCTGCGC GGTGCGGACG CCGCGCGGCT ACTCACCAGC
TACCTCGGCG GGGGCCGGTT GCCGCAGGCC GACACGGACC GCCTGCTTGC CACCGCGCAG
GGTAATCCGT TCTACCTGGC TGAGCTGGTC ACCCTACTGA TGGAGCGGGG CGCGCTGACC
GCCGGTGCCG ACGATGAATG GCAGCTCGCA CCGGGTTCGC TCGGCAGCCA GCTCCTCTCC
CGTGACCTCG CGGCCGTGCT CGCCGCGCGG ATCGACGCGC TGCCGCCGGA GGCCCGTTCG
GTGCTGCGGG ACGCGGCGGT GGTCGGCGAC ACCGTACCAG CGGGGGCGCT GGAGGCACTG
CGGGAGCAGC GGAGCGGTCG GGACGGCCGG CCGGCGGCGG TGGCCGCTGT GGAGCTGGAA
CGCGCGGTCG AGGAGTTGCT GCAACGCCGG ATGCTGCACC GCGCGTGGTC CGGCCACACG
TTCGCCACCC CGTTGATGCG GGAGGCGGCC TACGCCGGGG TCAGCAAGGC CGAACGGGCC
GAACGGCATG CGGCGCTCGC CCGCTGGGCG GCGGCCGATC CGCCGACCGG CACCCCCGCC
TCCGGTGGGT TGACCGAGGC CGCCCGGGAC GACTTCGTGG CCGGGCACGT GGAGCGAGCG
GTCGCGTTCG CCGACGCGGT GGGTCTGCGC CCGGACGCAC CCGCGCGGGC GGTGGTCCCG
GTCGGGGTCG CCGCCCTGGG CGCCGCCGCC CGCCGGTCGA TGCACGCCGG GGAGCCGCTG
CTGGCGGTGG AGTACGCCGA ACGCGCCAGC GGGCTGGCTG CCGATGCGGT CCCGGCGGCC
GACCGGGTGG TGCACGCCTG GGCGCTGCTC CAGGTCGGCA AGGCTGCCGA CGCGCTCGCG
AACGCGGAGA AGATCGCCGC CAACGCCGGG GACGAGGCGG CCACCCAGGT CAGTGCGTTA
CTCCTCGCCG GGCAGGCGCA CCAGACGACG GGCGACCCGG ACCGGGCGGT GAGCTCCTGG
CAGGAGGCGT TGCAGGTCGC CTCCGCGCAC GAGTTGTCAA CGCTGCGTGC GGCGGCCATG
CGGCGGCTCG GGATGGCCGA TTTCATCGCC GGCCGGCTGG GTCAGGCGAG CAGCCGGCTC
GCCGCCTCGT ATCAGACGAG TCTCGCGGTG CAGGATCGCC GCGGGCAGGC ATGGTCGTTG
CAGAACCTGG CCTGGGTCAC CACCACCCGG GGCGACTTCG CCGGCACCGA CGCGGTACTC
GGTCGGGCCG CGCGGTTGTT CGCCGAGCTG AAGGATCCGT ACGGACGGGC CTGGTTGCGG
GGGACCACCG CCTTCGCCCG GCTGCTCGCC GGTCGGCTGC ACGAGGCCGG CCGCCTCGCC
CGGGTGTTCC TGCCGTTCGG CGAGCGGGTC GGCGAGGAGT GGGCGGTCGG CACCCTGCGG
GCGGTGGAGG CGTTCGCCAC TGCCGAGCTG GGTGATCTGG CGGAGGCGGA CCGGGCGGCC
CGGCGGGCGT ACCGGGACTT CGACGCCGCC TACGACGAGT GGGGGCGGGG CTTCGCGCTG
GTGGTGCGTG GGGTGATCGC GCGGGGCCTG GGCGAGCCGG AGCACGCGGC GGACCTGCTT
GCCGACGCGA TGGGCTACGC CCGCCGTACC TCGCATCCGC TGTTGACCGG CATGGCTGGC
ACACTGCGGG GGTTCGTGGC GTTGGACTCG GGCGACCATG ACCTGGCCGA GCGGGAGGCG
CGGGCGGTGC TGACCGCCGT CGAGCCGCAC AACCCGTGGG CGCCGGCGCA GGTGGCGCCG
CGGGTGCTGC TGGCCACCGC CCGGCTGGCG GCCGGCGATC CGGCCGTCGC GGTTGGCCTG
CTCGCCCCGG TGGCGACCGC CGCGCAGACC ACTCCGGCGT TGCTGATCTC CCGTCGCCTG
GTGATGGCCC AGTACGCCTC CGCCCTGCTC GCTCACGGCC AGACCGAGCA GGCGTTGGAC
TGGGCGCAAC GGGCCCGTAC CGTCCCGGCG GAGGACGTAC GCAGTCAGGT GCTCGCCGCG
GCCGTGTTGG GGAAGGCGCT CGCCGCTACC GGCGACTCGA CGGCGGCGCG GGCCAGCGCC
CAGGAGGCGG TACGCCTGGC GTACGCGACC GAGCAGCGTA GCGAGCGTCG GACCGCGGAC
GACCTCCTCG GCCGGTTGAC GGCGCCCGAC TGA
 
Protein sequence
MTCPVCGTVA VPGARFCHNC GAALPAAATL PATERRVVTV LFGDLSDFTS WSEDLDPERV 
GAVTDRVLAA LAGAVKTFGG HVDKLTGDGI MAVFGAPVAH EDDAERAVRA ALSMQRAVRR
VLDDERGGGG PLGLRVGLNT GDVIAGIQAA LEYTVIGDTV NTAARLADTA AVGAVYAGDR
TAAATRHVAS WRALRPLRLK GKREPVTAYE LLGLLDATGT RSGLGDEAPF VGRETEIGRV
AGRLAEVVDR GEPRVLLVTA EAGIGKSRFA TEVERLAAGY DVGAGRFAAY TGARVLSVRC
VAFGERRRLA PLADLVRAAV GLPTDTATAL TRPAVEERLR RLGQRLGRTG GDPVPIATEQ
LLALLGYAEL PSGPTDQGEW RSACQSADGD AVPNAVADLL SAIAAEAPLV VVVDDLHDAT
AESTHALGET LSRIVGPVLV LLLGRPELVR TAGALTQVAD AEVHALPPLR GADAARLLTS
YLGGGRLPQA DTDRLLATAQ GNPFYLAELV TLLMERGALT AGADDEWQLA PGSLGSQLLS
RDLAAVLAAR IDALPPEARS VLRDAAVVGD TVPAGALEAL REQRSGRDGR PAAVAAVELE
RAVEELLQRR MLHRAWSGHT FATPLMREAA YAGVSKAERA ERHAALARWA AADPPTGTPA
SGGLTEAARD DFVAGHVERA VAFADAVGLR PDAPARAVVP VGVAALGAAA RRSMHAGEPL
LAVEYAERAS GLAADAVPAA DRVVHAWALL QVGKAADALA NAEKIAANAG DEAATQVSAL
LLAGQAHQTT GDPDRAVSSW QEALQVASAH ELSTLRAAAM RRLGMADFIA GRLGQASSRL
AASYQTSLAV QDRRGQAWSL QNLAWVTTTR GDFAGTDAVL GRAARLFAEL KDPYGRAWLR
GTTAFARLLA GRLHEAGRLA RVFLPFGERV GEEWAVGTLR AVEAFATAEL GDLAEADRAA
RRAYRDFDAA YDEWGRGFAL VVRGVIARGL GEPEHAADLL ADAMGYARRT SHPLLTGMAG
TLRGFVALDS GDHDLAEREA RAVLTAVEPH NPWAPAQVAP RVLLATARLA AGDPAVAVGL
LAPVATAAQT TPALLISRRL VMAQYASALL AHGQTEQALD WAQRARTVPA EDVRSQVLAA
AVLGKALAAT GDSTAARASA QEAVRLAYAT EQRSERRTAD DLLGRLTAPD