Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4339 |
Symbol | |
ID | 5060824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4915940 |
End bp | 4918066 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640476601 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001161145 |
Protein GI | 145596848 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.108178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.933802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAT CGATCGGTCC AACTGCCCGG CACTCCGCGC CGGCTGTGAA CGCGGCAGCC GGCCGGCCCC TGCTGGAACT ACGTGACCTC GACACCGACA TCGCGCTGCG CCGTGGCACG GTACACGCCC TCGACGGCAT CAGTCTTGAG GTCGCGCCCG GGCAGACCCT CGGCGTCGTG GGCGAGTCCG GCAGCGGCAA GACGATGACC GCATTGTCAA TCATGGGACT ACTTCCGCCC GGCGGTCGCG TCACCGGTGG GCAGATTCTG TTCGAGGGAC GGGATCTGCG ATCGTTGCCG GCCGATGAGG TACGCCGGAT CCGAGGTGTC CGGATGGGCA TGGTCTTCCA GGACCCGCTC ACCTCGCTCA ACCCCACCAT ACGCATCGGT GCGCAGGTGG CCGAACCACT GCGCGTACAC AAGCGGGTCG GCAGGGCGGA GGCCCGGGAC CGGGCCATCG AGATCCTGCG CCGGGTCGGG ATGCCGCGCC CGGAACAAAT CGTCGACAAC TATCCGCACG AGCTGTCCGG CGGTATGCGG CAACGGGTCG CCATCGCCAT GGCCCTGGTC TGCTCACCAA GCCTGCTCAT CGCCGACGAG CCGACCACCG CACTCGACGT CACCACCCAG CGGCAGATCC TCGAACTCAT CGACGATCTT CGGGAAGAGT TCGGGATGGC CGTCATCCTG GTCACCCACG ACCTCGGGGT GATCGCCGGT CGGGCGGACC GGGTAGCCGT CATGTACGCC GGTCGGGTCG TGGAGACCGC GGCCACCGAG CAGCTGTTCC AAGCGCCCCG ACACCGCTAC ACCGAGGCCC TGATGCGGGC GCTACCCGAG TCGGCCATCC GGGACAGCGG CGGACACGAC CGGCTGATCA GCATCCCGGG ACTGCCACCG GACCTGTCCG GTCCCCTAAC CGGATGCCGG TTCGCGCCGC GGTGTTCGTA TGTCAGCGAC AGCTGCCGGA CCACCGACCC GGCCCTGATC CCGGGCGCGC ACCAGCACGC GTGTCTGCAC CCGGTACCCA CGCCCACCGC GGCGGTCACC GCGCCGGTCC CGGCACCGAT CGAGCCGGCG ACGGCGCCGG TCACCGCGGC ACCGCCCGAA TCCACGGAGC CGCCAGTCCT GTCGGTGCGG AACCTGATCA AGAACTACCC GGTGCACGGC CGTGGGCTAC TGCGCCGGAC AGCCGGGCAG GTAAGCGCGG TAGCCGATGT CTCCTTCGAG GTCAGGCCCG GAGAGACCTT CGGGCTCGTC GGCGAGTCCG GCTGCGGCAA GTCCACCGTG GGACGGCTGT CCGTCGGCCT GGAACGGGCC TCCGCCGGGC AGATCGTGTT GGACGGTACG GATCTCGCCG ACCTCACCGG CCGGGAACGA CGCCGGATGC ACCGGCACGT CCAACTCATG TTCCAGGACA GCTATGCGGC GATGAACCCT CGGATGCGCG TTGACGCCAT CCTCGCCGAA CCACTCGAGA TCCAGAAGGT GGGTGACGGT TCGGCACGGC AAGCACGGAT CGCCACTCTC CTCGACCAGG TGGGGTTGCC CCGGCGGGCG CTGGAACGCT ACCCCCACGA GTTCTCCGGC GGTCAGCTGC AGCGGATCGG GCTGGCCCGG TCGCTGGCGT TGCGCCCCCG GCTGATCGTT GGCGACGAGC CGGTGAGCGC GTTGGACGTC TCGATCCAGG CGCAGGTGCT CAACCTGATG CGGGACCTGC AGCGCGAACT CGATCTGGCG TACATCTTCA TCAGTCATGA TCTGTCTGTT GTCGACTACA TGGCAGACCG GATCGGTGTG ATGTACCTCG GCAAGCTCGT CGAGGTCGGG CCCGCCCGGG AAGTGGTGCG GGCTGCCCGG CATCCGTACA CGCAGGCACT GGTCGACGCG GTCCCGTCCA TCGAGCCGAA CCGGGCAGCC ACTCGCGACG GCATGACCAT CCGGGGCGAG CTTCCCAGTG CCCTCGACCC ACCCACCGGG TGTCGGTTCC GCACGCGCTG CCCCTACGCG GTGGACATCT GCACAACGGA GCCTCCACTG ACCGGTGACC TGCACCAGGT GGCCTGCCAC CTGCCGCTAC GCCCGGAGCC GACCAGCACC TCCACGCAGG CCCAGGCTGT CGTATGA
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Protein sequence | MSESIGPTAR HSAPAVNAAA GRPLLELRDL DTDIALRRGT VHALDGISLE VAPGQTLGVV GESGSGKTMT ALSIMGLLPP GGRVTGGQIL FEGRDLRSLP ADEVRRIRGV RMGMVFQDPL TSLNPTIRIG AQVAEPLRVH KRVGRAEARD RAIEILRRVG MPRPEQIVDN YPHELSGGMR QRVAIAMALV CSPSLLIADE PTTALDVTTQ RQILELIDDL REEFGMAVIL VTHDLGVIAG RADRVAVMYA GRVVETAATE QLFQAPRHRY TEALMRALPE SAIRDSGGHD RLISIPGLPP DLSGPLTGCR FAPRCSYVSD SCRTTDPALI PGAHQHACLH PVPTPTAAVT APVPAPIEPA TAPVTAAPPE STEPPVLSVR NLIKNYPVHG RGLLRRTAGQ VSAVADVSFE VRPGETFGLV GESGCGKSTV GRLSVGLERA SAGQIVLDGT DLADLTGRER RRMHRHVQLM FQDSYAAMNP RMRVDAILAE PLEIQKVGDG SARQARIATL LDQVGLPRRA LERYPHEFSG GQLQRIGLAR SLALRPRLIV GDEPVSALDV SIQAQVLNLM RDLQRELDLA YIFISHDLSV VDYMADRIGV MYLGKLVEVG PAREVVRAAR HPYTQALVDA VPSIEPNRAA TRDGMTIRGE LPSALDPPTG CRFRTRCPYA VDICTTEPPL TGDLHQVACH LPLRPEPTST STQAQAVV
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