| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4322 |
|---|
| Symbol | |
|---|
| ID | 5060807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4895041 |
|---|
| End bp | 4895718 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640476584 |
|---|
| Product | cyclic nucleotide-binding |
|---|
| Protein accession | YP_001161128 |
|---|
| Protein GI | 145596831 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0230513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGG TACTGGCCCG GAGTGGGATC TTCCAGGGGG TCGACCCGGA GGCTGCCGAG
GCGTTGGCCA AGGAGATGGA GACGATCGAG GTCCGCAAGG GCGAGGTTGT TTTCAACGAG
GGCGAGCCCG GTGACAGCCT GTACATCCTC CTCTCCGGCA AGATCAAGGT CGGGCGCCGG
GCGGCCGACG GGCGACAGAA CCTGATCGCG GTCATGGGCC CTTCGGACAT GGTCGGCGAG
CTGTCGCTCT TCGATCCGGG GCCACGGACG GCAACCGCGA CGGCGGTGAC CGACACCCGT
CTGGTGCGGC TCCGTAAGCA GGCGCTGCGC CCCTGGCTGA ACAACCGGCC GGAGATCGCT
GAGCAGTTGC TGCGGGTGCT CGCCCGCCGG CTGCGCCGCA CCAACGACTC ACTGGCCGAC
CTGATCTTCA CTGACGTGCC CGGTCGGGTC GCGAAGAACC TGCTCCAGTT GGCGGGCCGG
TTCGGCACCC GGGACGGTGG GGTGCTGCGG GTGACCCACG ACCTGACCCA GGAGGAGATC
GCCCAGCTCG TCGGCGCCTC CCGCGAGACG GTCAACAAGG CCCTCGCCGA CTTCGCCTCG
CGGGGCTGGC TGCGCCTGGA CGGCAAGAGC ATCATCATCC TCGACCCGGA GCGCCTGGCT
CGCCGCGCGC GCGTCTGA
|
|---|
| Protein sequence | MDEVLARSGI FQGVDPEAAE ALAKEMETIE VRKGEVVFNE GEPGDSLYIL LSGKIKVGRR
AADGRQNLIA VMGPSDMVGE LSLFDPGPRT ATATAVTDTR LVRLRKQALR PWLNNRPEIA
EQLLRVLARR LRRTNDSLAD LIFTDVPGRV AKNLLQLAGR FGTRDGGVLR VTHDLTQEEI
AQLVGASRET VNKALADFAS RGWLRLDGKS IIILDPERLA RRARV
|
|---|
| |