Gene Strop_4314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4314 
Symbol 
ID5060799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4887233 
End bp4888528 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content72% 
IMG OID640476576 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001161120 
Protein GI145596823 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.106523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGCTCT CGCTGGCGTC GGTCGCCGTC GCCGTGCCGG TCGCCGTCGT CCCGCACGCC 
GAGCAGGTCA GCACCGCCCT GCCCGGCCAC ACTGGGCAGA TCGGCGCCGC GGGCCCCGGC
AACTCGGCCG GCAGGACTCT GGATCTGACC GAGCGCTCCG CCGACCAGGT GCGCGACGAT
CAGTGGCAGC TCGACATGTT GCGCGCCAGT ACGGCATGGC GCACCTCGAC CGGGGCCGGG
GTGGTGGTGG CGGTCATCGA CTCCGGTGTG GACGACACGC ATCCAGACCT GGCTGGACGG
GTGCTGCCCG GACTCGACCT GGTCGAGTCG TCGCCCACCG CTGATCCGGA TCCGGTGGGT
CACGGTACGA CCGTGGCCGG GTTGATCGCG GGCCGCCACG ATGACAGCAG TGGGGCTGTG
GGCCTCGCGC CCGACGCCCG GATCCTGCCG GTACGGGTCC TGGACGCGGA GAACCGTTAC
GACGACGCGT TGATCGTGGC CAACGGCGTA CGGTGGGCCG TCGACAACGG TGCCCGGGTG
ATCAATCTGT CGCTCGGTGG GGGCAGTGCC AGCCCGGCGC TGGCCGCCGC GTTGGACTAC
GCATTCGCCC GGGATGTGGT TGTCGTCGCC TGCACCGGCA ACGAGAGCGC CCCGAGCTCC
AGCACGGTCT GGTACCCGGC CCGGGAGCCG GGGGTGATCG CGGTCTCCGG GCTGGACCGG
GACAGTGAGA AGCTCTGGTC CGGCGCGATC ACCGGCCGGG AGACGGTGCT CACCGCGCCC
GCAACCGGTC TCGTGGGCGC ACGGCCACCG GACGGGTACT GGCAGGTTCA GGGCACCAGC
TTCGCCACGC CACTGGTCTC GGCCACCGCC GCGCTGATCC GCGCCCGGTT TCCGGAGATG
CCCGCCGGCG ACGTGATCAA TCGGATGCTG CACACCGCTC GGGACATCGG TCCCGCCGGG
CAAGACGACA GCTTCGGGTA CGGGCTGGTC GACCCGGTCG CGGCGCTGAC CACCGAGGTG
GCGCCGGTCG GGCTCAACCC GCTGGACGAC CAGTCCTCAC CGGGGATTGT CGGCTTCGGT
CCGGCACCGA TCACGGCCAG CGCGGACACC GACCGTACCG GGATCGACTT CGCCCCGTCC
GCCCCGTCCG CGCGGTCCGG GTCATGGGAA CCGTGGGACC CGTGGTCGGC TGGAGCCGGT
GGTTCCTCCA CATCGGATCA ATGGTGGACC GGGCTGGCGT TTCCCGTCGC GCTGGTCGCC
GGTGGCGACC GGAGGGTGGG CCGGTTCCGC CGGTAG
 
Protein sequence
MWLSLASVAV AVPVAVVPHA EQVSTALPGH TGQIGAAGPG NSAGRTLDLT ERSADQVRDD 
QWQLDMLRAS TAWRTSTGAG VVVAVIDSGV DDTHPDLAGR VLPGLDLVES SPTADPDPVG
HGTTVAGLIA GRHDDSSGAV GLAPDARILP VRVLDAENRY DDALIVANGV RWAVDNGARV
INLSLGGGSA SPALAAALDY AFARDVVVVA CTGNESAPSS STVWYPAREP GVIAVSGLDR
DSEKLWSGAI TGRETVLTAP ATGLVGARPP DGYWQVQGTS FATPLVSATA ALIRARFPEM
PAGDVINRML HTARDIGPAG QDDSFGYGLV DPVAALTTEV APVGLNPLDD QSSPGIVGFG
PAPITASADT DRTGIDFAPS APSARSGSWE PWDPWSAGAG GSSTSDQWWT GLAFPVALVA
GGDRRVGRFR R