Gene Strop_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4200 
Symbol 
ID5060684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4767331 
End bp4768218 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID640476461 
Producthypothetical protein 
Protein accessionYP_001161006 
Protein GI145596709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.104599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.534251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGACC GCCTCATTCA CCTGCACCGG ATCCGCTCGC TCAACCCCGA CGAGGACCAC 
CTGGCGATCT ACCAGACCAT GCTGCGGTAC GAGTTCCCGT GGGACATGAA GCTCGGACTC
AACCTCGCCT TCAACCGATC GTTCTCGATC CCGGAGATCG CCGCGGTCCA CACCGCCACC
GGCGAGCTGA CCGAGCGCAC CCAGCAGCGG ATCGACGACA CCGGTCTGCT GATGTACGAA
ATCGTGCTCA ACGGCTTCGA GCAGACCCGC GGGCGCGACG CGCTCCGCCG GATCAACCAG
ATCCACCGCT CCCACCGCAT CAGCAACGAC CACTACCGCT ACGTCCTCGC CTGCCTGATC
GTGGTCCCCA CCCGCTGGCT GGAACGCTAT GGCTGGCGCC AACCCTGTTG TCACGAGCGA
CGCGCGACCT GGCGGTTCTA CCTGGAGTTG GGCCGCCGGA TGGGAATCAC GGACATTCCC
GACTCCTACG AGGCGGTCGA GGCCTGGTTC GACGAGTACG ACCAGGTCCA GCTGCGCCCC
AACGACGATG CGGCCACGAT CGAGCGAGCC ACCCGGATGC TGATGCTGAA CCGGCTACCC
GTCGCTCTCG CCCCACTGGG CAACGCACTG GTCAGTGCCA TCTACGACCC GCCCCTACGC
GCCGCGACCC GGGTCGCGAC CCCACCCTGG CCGGCGCGCG TCGGACTGCA CCTGGCCCTA
CGCGCCCGCG CGTACACGCA GCGATGGCTC GGGCGACCGC CAGCGATCCC ACTGTTCGCC
GATGGCATCA CGACCAAGAC CTACCCCAGC GGGTACGACA TCAGCCAGCT CGGGCCCCAT
CCCACCGCCC AAGCCGGCGA CACCCCCACC CCGAACGCGA ACGAGTGA
 
Protein sequence
MRDRLIHLHR IRSLNPDEDH LAIYQTMLRY EFPWDMKLGL NLAFNRSFSI PEIAAVHTAT 
GELTERTQQR IDDTGLLMYE IVLNGFEQTR GRDALRRINQ IHRSHRISND HYRYVLACLI
VVPTRWLERY GWRQPCCHER RATWRFYLEL GRRMGITDIP DSYEAVEAWF DEYDQVQLRP
NDDAATIERA TRMLMLNRLP VALAPLGNAL VSAIYDPPLR AATRVATPPW PARVGLHLAL
RARAYTQRWL GRPPAIPLFA DGITTKTYPS GYDISQLGPH PTAQAGDTPT PNANE