Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4120 |
Symbol | |
ID | 5060602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4686462 |
End bp | 4687232 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640476381 |
Product | abortive infection protein |
Protein accession | YP_001160928 |
Protein GI | 145596631 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCTCG ATCTGGACCG GCCGTTGACT CGCCGGACGC TGAGCACCGA AACGTGGCTG GTCCTCGGCC TGTCACTCGG CCAGTCAGCC GTCTACGCCC TGGTGTCGAT CGTCGCCAAA CTCACCGCCG ACGGACCGCT GTCGGCACAG ACCGCCGCAC TGAACACGTC CCGATCCGAG CGGCCCTACC TCGACCTCAC CTACCAGCTG CTCGTGATCA GCTTCGCCCT GCTGCCGGTA CTGCTCGCCG TACACCTGCT GGCTCGCAAC CCCGGCGACC CGGCCCGGAC TCTCGGCCTG GACGCCCGAC ATCCCGGCCA GGACCTCGTC CGCGGCGCCG GCCTGGCCGC GCTGATCGGC CTGCCCGGCC TGGCCCTGTT CTGGGCGGCG GCGCGGCTCG GCCTCAACGC GACGCTGGTG CCCGCCGCCC TGCCGGACCT CTGGTGGGCA GCACCAGTGT TGATCTTTGC TGCGGTCCAG AACGCCGTGC TGGAAGAAGT GATCGTGGTC GGCTACCTCG TCACCCGACT ACGGCAGCTC CAGTGGCGCC TCGGTGCGGT GGTCGCCACC AGCGCGCTAC TCCGCGGCTC CTACCACCTC TACCAGGGGT TCGGCGCGTT CGTCGGGAAC GCGGTCATGG GCGTCGTGTT CAGCCTGTAC TTCCTACGAA CCCGGCGGGT GATGCCACTG GTGGTGGCGC ACACGCTCCT GGATATCGTG GCCTTTGTCG GCTACACGGC GCTGCCGAAG GAATGGTTCG ACTGGCTCTG A
|
Protein sequence | MTLDLDRPLT RRTLSTETWL VLGLSLGQSA VYALVSIVAK LTADGPLSAQ TAALNTSRSE RPYLDLTYQL LVISFALLPV LLAVHLLARN PGDPARTLGL DARHPGQDLV RGAGLAALIG LPGLALFWAA ARLGLNATLV PAALPDLWWA APVLIFAAVQ NAVLEEVIVV GYLVTRLRQL QWRLGAVVAT SALLRGSYHL YQGFGAFVGN AVMGVVFSLY FLRTRRVMPL VVAHTLLDIV AFVGYTALPK EWFDWL
|
| |