Gene Strop_4120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4120 
Symbol 
ID5060602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4686462 
End bp4687232 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID640476381 
Productabortive infection protein 
Protein accessionYP_001160928 
Protein GI145596631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCG ATCTGGACCG GCCGTTGACT CGCCGGACGC TGAGCACCGA AACGTGGCTG 
GTCCTCGGCC TGTCACTCGG CCAGTCAGCC GTCTACGCCC TGGTGTCGAT CGTCGCCAAA
CTCACCGCCG ACGGACCGCT GTCGGCACAG ACCGCCGCAC TGAACACGTC CCGATCCGAG
CGGCCCTACC TCGACCTCAC CTACCAGCTG CTCGTGATCA GCTTCGCCCT GCTGCCGGTA
CTGCTCGCCG TACACCTGCT GGCTCGCAAC CCCGGCGACC CGGCCCGGAC TCTCGGCCTG
GACGCCCGAC ATCCCGGCCA GGACCTCGTC CGCGGCGCCG GCCTGGCCGC GCTGATCGGC
CTGCCCGGCC TGGCCCTGTT CTGGGCGGCG GCGCGGCTCG GCCTCAACGC GACGCTGGTG
CCCGCCGCCC TGCCGGACCT CTGGTGGGCA GCACCAGTGT TGATCTTTGC TGCGGTCCAG
AACGCCGTGC TGGAAGAAGT GATCGTGGTC GGCTACCTCG TCACCCGACT ACGGCAGCTC
CAGTGGCGCC TCGGTGCGGT GGTCGCCACC AGCGCGCTAC TCCGCGGCTC CTACCACCTC
TACCAGGGGT TCGGCGCGTT CGTCGGGAAC GCGGTCATGG GCGTCGTGTT CAGCCTGTAC
TTCCTACGAA CCCGGCGGGT GATGCCACTG GTGGTGGCGC ACACGCTCCT GGATATCGTG
GCCTTTGTCG GCTACACGGC GCTGCCGAAG GAATGGTTCG ACTGGCTCTG A
 
Protein sequence
MTLDLDRPLT RRTLSTETWL VLGLSLGQSA VYALVSIVAK LTADGPLSAQ TAALNTSRSE 
RPYLDLTYQL LVISFALLPV LLAVHLLARN PGDPARTLGL DARHPGQDLV RGAGLAALIG
LPGLALFWAA ARLGLNATLV PAALPDLWWA APVLIFAAVQ NAVLEEVIVV GYLVTRLRQL
QWRLGAVVAT SALLRGSYHL YQGFGAFVGN AVMGVVFSLY FLRTRRVMPL VVAHTLLDIV
AFVGYTALPK EWFDWL