Gene Strop_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4114 
Symbol 
ID5060596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4679076 
End bp4679609 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID640476375 
ProductPEBP family protein 
Protein accessionYP_001160922 
Protein GI145596625 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG AACGACCGAT CGCCCCGGAC CCGTACGAAC TCCTGCCGAC GGTGCCATCG 
TTCACGCTCA CCAGTGACGA CGTACGCAAC GGCGAGCCGA TGGACGCGAC GTATGCCCAT
CCGAGCGTCG GCGGCGACGA CCTCTCCCCA CACCTGGCCT GGTCAGGCTT CCCCGCCGAG
ACCAAGGGTT TCGTCGTGAC CTGCTTCGAC CCGGACGCGC CGACCGGCAG TGGCTTCTGG
CACTGGGTAC TGGTCAACCT GCCGACGAGT GTGACGGAGC TGCCGCGGGG AGCGAGTAGC
GACGGCCTGG GCGGCGCCTT CACGGTCCGC AATGACTACA GTCAGCGGGG CTACGGGGGC
GCCGCCCCGC CACCCGGCGA TCACCCACAC CGATACCTCT TCGCGGTGCA CGCACTGGAC
GTGGAGCGCC TCGACGTCAC CCCCGACGCC TCGCCGGCGT ACGTGGGCTT CAACCTCGCC
TTCCACACCC TGGCCCGCGC GGTGATCCGG CCGACCCATC AGGTCACGCA GTAG
 
Protein sequence
MTLERPIAPD PYELLPTVPS FTLTSDDVRN GEPMDATYAH PSVGGDDLSP HLAWSGFPAE 
TKGFVVTCFD PDAPTGSGFW HWVLVNLPTS VTELPRGASS DGLGGAFTVR NDYSQRGYGG
AAPPPGDHPH RYLFAVHALD VERLDVTPDA SPAYVGFNLA FHTLARAVIR PTHQVTQ