Gene Strop_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4111 
Symbol 
ID5060593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4674603 
End bp4675322 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID640476372 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_001160919 
Protein GI145596622 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGA TCCTCCGTTC GGCCATCCGC AACGACATCG GCCTTGTCCG AAACAACAAT 
GAGGACTCCG CCCTGGCCGG TGAGCGCCTC CTCGCAGTCG CGGACGGCAT GGGCGGTCTG
CCCGCCGGGG AGGTGGCGAG CGAGATCGTC ATCCGAATCC TGGACGAACT GACCCCGCCA
AGCACCCCCG CTGAGGCCGC CGACGCGCTC CGCGCCGTGG TCAGCGCCGC AAACCAGCGC
ATCCACGCCG CCATCGCCGC GGACCCCGCC CGGGAAGGCA TGGGGACGAC GCTGACCGCG
GCCCTGCTCG CCGACGACAC GCTGGTGCTG GCCCAGGTCG GCGACTCCCG CTGCTACCTG
CTGCGCGATG GGGAGCTGAC CCTGATCACC CGGGACGATA CGTTCGTGCA GGCGCTGGTA
GACCAGGGGG CGATCACTCC CGAACAGGCT CGGCACCATC CCCAGCGGTC GCTGGTGACC
CGAGCGGTAC AGGGAGCCGG TGCCCCGCCC GCGATCGGGA TCCTGACCGT GGCCTCCGGC
GACCGGCTGC TGCTGTGCAG CGATGGGCTC TCCGACTACG TCGAGCACGA GGCGATCACC
GCCACCCTGA CCCAACACGG CGACCGGCAG CTCTGCGGGG AACAGTTGGT CAAGCTCGCC
CACCAGGCCG GCGCGCCGGA CAACGTCACC GTCGTGGTCT CCGACGTGAT CACAGCCTGA
 
Protein sequence
MTLILRSAIR NDIGLVRNNN EDSALAGERL LAVADGMGGL PAGEVASEIV IRILDELTPP 
STPAEAADAL RAVVSAANQR IHAAIAADPA REGMGTTLTA ALLADDTLVL AQVGDSRCYL
LRDGELTLIT RDDTFVQALV DQGAITPEQA RHHPQRSLVT RAVQGAGAPP AIGILTVASG
DRLLLCSDGL SDYVEHEAIT ATLTQHGDRQ LCGEQLVKLA HQAGAPDNVT VVVSDVITA