| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4066 |
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| Symbol | |
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| ID | 5060548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4624218 |
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| End bp | 4625489 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476327 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001160874 |
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| Protein GI | 145596577 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.449431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.299227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGG AGAACGACGC CGACGTGATC GTCGTGGGCG CAGGCCCAGG TGGTTCGGCG
ACCGCATACC ACCTGGCCCG GCATGGCGTC CGAGTGCTGC TACTGGAGAA GACCGAGTTT
CCGCGGGAGA AGGTCTGCGG CGACGGGTTG ACCCCGCGCG CAGTGCGCCA GCTGGTGCGG
ATGGGTGTGG ACACGTCGAC CGAGGCGGGC TGGGTGCGCA ACCGCGGCCT GCGGGTCGTC
GGCGGTGGCC TCCGACTCGA ACTGGACTGG CCCGACCTGG CCAGCTTTCC CAACTACGGC
CTGGTGCGTC CCCGGCTGGA CTTCGACGAA CTGCTCGCCC AGCGCGCCGT CGTCGCCGGT
GCCGAGCTGC GCACCGGGGT TGACGTCACC GCCCCGATGT TCGACCGGGC CGGACGGGTG
GTCGGGGTTG AGGCGGAGGT CGGCCCGGAG CGGGAACCAG CCACCTTCCG GGCTCCCCTG
GTCGTCGCCG CGGACGGCGT CTCCGGCCGC TTCCCGCTCG CCCTCGGGCT GGCCAAGCGG
GATGACCGAC CGCTCGGGGT GGCTGTCCGG CGGTACTACC ACTGCCCGGT GAAGCAGGAC
GACAACTACC TCGAGTCCTG GCTGGAGCTG CGCCGCAAGG GCAGCGACGC GCTTCTGCCC
GGCTACGGCT GGATCTTCGG GCTGGGCGAC GGCCGGGTGA ACGTCGGGCT CGGTGTATTG
AACTCCTCAT CCGCCTTCGG TAAGACGAAC TACCGGCGGC TGCTCACCGA CTGGCTCGCC
AACACCCCCG AGGAGTGGGG GATCGCCGAC GAGGCCAACG CCGAGGGGCC GATCCTCGGC
GCGGCGCTGC CGATGGGCTT CAACCGGGTG CCGCACTACT CCCGCGGAAC GCTGCTCGTC
GGTGACTCCG GCGGCATGGT CAACCCGTTC AACGGCGAGG GCATCGCGTA CGCGATGGAG
TCGGGGGAGC TGGCCGCGGA GGTCGCGGTG CAGGCGCTCG CCCGCCCGGC CGGCGTCGAG
CGGGAGCGCG CGTTGATGGC GTACCCGGCG GAGCTGAAGG ACCGGTTCGG CGGCTACTAC
CGGCTCGGCG GGATCTTCGT CAAGCTGATC GGTCGTCCCG AGATCATGCG CGCCGCCACG
AAGTACGGCC TGCCACACCC GATGCTGATG CGCTTCGTGC TCAAGTTGCT GGCCAACCTG
ACCGACCCGC GCGACGGGGA TGCGATGGAC CGGGTCATCA ACGCGATGAC GAAGGCGGCG
CCAGCTGTGT GA
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| Protein sequence | MTTENDADVI VVGAGPGGSA TAYHLARHGV RVLLLEKTEF PREKVCGDGL TPRAVRQLVR
MGVDTSTEAG WVRNRGLRVV GGGLRLELDW PDLASFPNYG LVRPRLDFDE LLAQRAVVAG
AELRTGVDVT APMFDRAGRV VGVEAEVGPE REPATFRAPL VVAADGVSGR FPLALGLAKR
DDRPLGVAVR RYYHCPVKQD DNYLESWLEL RRKGSDALLP GYGWIFGLGD GRVNVGLGVL
NSSSAFGKTN YRRLLTDWLA NTPEEWGIAD EANAEGPILG AALPMGFNRV PHYSRGTLLV
GDSGGMVNPF NGEGIAYAME SGELAAEVAV QALARPAGVE RERALMAYPA ELKDRFGGYY
RLGGIFVKLI GRPEIMRAAT KYGLPHPMLM RFVLKLLANL TDPRDGDAMD RVINAMTKAA
PAV
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