Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4060 |
Symbol | |
ID | 5060542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4618563 |
End bp | 4619894 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640476321 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_001160868 |
Protein GI | 145596571 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.306589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCC CTCGGCCGGA GACGCTGGCC AAGCTCACGC CGGTGCTCAC CAAGCGCTGG CTGTCGCCGG ACGCCTGGCG GATCGGCACC TATGAGCGGC TGGACGGGTA CGCCGCGTTG CGCAAGGCCA TGCAGGCCCA CCCGGACGAC CTGATCCAGC TGGTCAAGGA CTCTGGGCTG CGCGGCCGTG GCGGCGCGGG CTTCCCGACC GGTCTCAAGT GGGGGTTCAT CCCGCAGGAG CCGGACGGCA AGGCCCCGAC GCGACCGCAC TACCTGGTGG TCAACGCGGA CGAGGGCGAG CCGGGCACCT GCAAGGACCT GCCGCTGATG ACGCACGACC CGCACTCCCT GATCGAGGGT GTGATCATCG CGTCGTACGC GATCCGGGCC AACCGCGCCT ACATCTACAT CCGCGGCGAG GCGGTACACG CCGCCCGCCG GCTGCGCCAT GCGGTGCAGG AGGCGTACGC CCGGAACTAC CTCGGGAAGA ACATCCTCGG CAGCGGCTTC GACCTGGATC TGGTGGTGCA CTCGGGGGCC GGGGCGTACA TCTGCGGTGA GGAGACCGCG CTCCTGGACT CGCTGGAGGG GTTCCGCGGC CAGCCCCGGC TGCGCCCGCC GTTCCCGGCG ACCCATGGTC TGTACGCCAG CCCGACAGTG GTGAACAACG TCGGCACCAT CGCCTCGGTC CCGTACCTCG TCCTGGGTGG TGCCGCGTGG TGGCGGACCA TGGGCACGGA GAAGTCCTCC GGGCCGATGA TCTACTCGCT CTCCGGCCGG GTCGTGAACC CGGGCCAGTA CGAGTGCTCG ATGGGTGTCA CGCTTCGCGA GCTGATCGAG CTGGCCGGCG GTATGCGGCC GGGACACTCC CTGCGGTTCT GGACGCCGGG CGGCTCGTCG ACGCCGCTGC TGACCGCCGA TCACCTGGAT GTGCCGCTGG ACTTCGAGGG GGTGGCGGCG GCGGGGTCGA TTCTCGGCAC CACCGCGACG CAGATCTTCT CCGACCAGGA CTGCCCGGTC TACGCGACGT ACCGGTGGCT GGAGTTCTAC CACCACGAGT CGTGTGGCAA GTGCACCCCG TGCCGGGAGG GTAACTACTG GATGGTCCGT GTCTACCGCC GGATCCTCTC CGGTCAGGGC ACCCAGGAGG ACCTGGACAC ACTCCTGGAC ACCTGCGACA ACATTCTCGG CCGCTCGTTC TGCGGCCTCG GTGACGGCGC CACCAGCCCG GTGACCTCCT CGCTGAAGTA CTTCAAGCAG GACTACCTCG ACTACGTCGA GGGCCGGACC GCGCCGAAGC TCTCCGACAA GCAGCTGGTG GGGGCCCACT GA
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Protein sequence | MTTPRPETLA KLTPVLTKRW LSPDAWRIGT YERLDGYAAL RKAMQAHPDD LIQLVKDSGL RGRGGAGFPT GLKWGFIPQE PDGKAPTRPH YLVVNADEGE PGTCKDLPLM THDPHSLIEG VIIASYAIRA NRAYIYIRGE AVHAARRLRH AVQEAYARNY LGKNILGSGF DLDLVVHSGA GAYICGEETA LLDSLEGFRG QPRLRPPFPA THGLYASPTV VNNVGTIASV PYLVLGGAAW WRTMGTEKSS GPMIYSLSGR VVNPGQYECS MGVTLRELIE LAGGMRPGHS LRFWTPGGSS TPLLTADHLD VPLDFEGVAA AGSILGTTAT QIFSDQDCPV YATYRWLEFY HHESCGKCTP CREGNYWMVR VYRRILSGQG TQEDLDTLLD TCDNILGRSF CGLGDGATSP VTSSLKYFKQ DYLDYVEGRT APKLSDKQLV GAH
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