Gene Strop_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4013 
Symbol 
ID5060494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4561842 
End bp4562696 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID640476273 
ProductBRO domain-containing protein 
Protein accessionYP_001160821 
Protein GI145596524 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACC CACCTGGCCA GCCTGGAGGC GGCAGCGGAA GCAGCGGCGG CACCACCGGC 
CCCGGCCGCG AGATCACAAC CTTCGAATTC GGCGATCTCC CGCTGAGGAC AGTCACGGTC
GGCGGTGAGC CCTGGTTCGT GGTCGCTGAC GCCTGTCAGG GGTTGGATCT CACCAACCCG
AGCATGGCCG CGAGCAGGCT TCACGCCGAT GACCTAAGTA CTGCTGAGGT CATCGACGGC
ATGGGACGTA GGCAGCACGT CCGGATCACC AACGAGTCCG GCCTATACGA CTTGATCTTT
CAGAGTCGTA AGCCTGAGGC ACGTGCGTTC CGCCGCTGGG TGACTCACGA GGTGTTGCCC
GCGATTCGGG CGACGGGCCG GTACGAGTCG GTGCCGGCGG TGCCGCAGTC GTACGCGGAT
GCGTTGCAGC TTGCCGCGGA TCAGGCCCGG CAGCTTGACG CGCAGGCTGC CGAGTTGGCG
GAGGCCGCGC CGAAGGCCCA GTCGTGGGAC ACCCTCGCGT CGGCTGACGG CGACTGGTCA
GTCCGGGACG CCGCGAAGAT CCTGTCGCGC GATCCCAACC TGAACGTGGG GGAGCGGCGG
CTGTTCACGG TCCTCGGCGA GCAGCAGTGG ATCTATCGGC AGCGCGGGGA CGGCCGTTGG
CGGCCGTATC AGCGGGCTGT CGAGTCGGGC TGGCTGTCCG AACTACCCGC CTCGCACTAC
CACCCGCGTA CGGGGGAGCT GGTGCTTGAT GTGCCTCAGG TGCGGGTCAC CACCCGTGGT
CTGCATCTGT TGCATCGCCG GCTGGGTGGT GTGCAGCCGT TGCGGACGCA TGAGCAGACG
GCGCTGATCG CATGA
 
Protein sequence
MTHPPGQPGG GSGSSGGTTG PGREITTFEF GDLPLRTVTV GGEPWFVVAD ACQGLDLTNP 
SMAASRLHAD DLSTAEVIDG MGRRQHVRIT NESGLYDLIF QSRKPEARAF RRWVTHEVLP
AIRATGRYES VPAVPQSYAD ALQLAADQAR QLDAQAAELA EAAPKAQSWD TLASADGDWS
VRDAAKILSR DPNLNVGERR LFTVLGEQQW IYRQRGDGRW RPYQRAVESG WLSELPASHY
HPRTGELVLD VPQVRVTTRG LHLLHRRLGG VQPLRTHEQT ALIA