Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3997 |
Symbol | |
ID | 5060478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4548605 |
End bp | 4549621 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640476257 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001160805 |
Protein GI | 145596508 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.481692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACTC TCGACACCCC TACCCGCTCG ACCAGTAGCA GCCGTCGCCG GCTCGTCACC GCCCTGCTGG CGGGTGTGAC CGCGGTCGGT ATCGCCGCCG GCGGTACCGC CATCGCCACC AACAGCAGCA GCGAGGCCCA GGCCGGCGCC GCGGCCGCGG CCGGGAAACG GTCGAACCTG AACGAGGGAT TCGTCACCAC CCGCGACGGC GTGGACATCT TCTACAAGGA CTGGGGCCCC CACGACGGAC GACCCGTGGT CTTCAGCCAC GGCTGGCCCC TGAACTCCGA CAGCTGGGAA TCCCAGATGA TGCACCTGGC CGACAACGGC TACCGCGTCA TCGCCCACGA CCGCCGGGGC CACGGCCAGT CCTCCCAGAC CTGGGAGGGC AACGACATGG ACCACTACGC CGACGACCTC GCCACCGTCA TCACAAAGCT GAAGCTACGG GACGTGACTC TGGTCGGGTT CTCCACCGGC GGCGGAGAAG TCGCCCGCTA CGTCGGCCGA CACGGCACCG ACCGCATCGC CCAGGTCGCC CTCGTCGGCG CGGTCACCCC ACTGATGCTC AAGACCCCTG ACAACCCCAA CGGCGTACCC ATCGACGTCT TCGACGGCCT CCGGGAAGGC TCCCTCACCG ACCGCTCCCA GCTCTACCGC GACCTCGCCG AAGGACCGTT CTTCGGCGCC AACCGCCCCG ACGCCGAGGT ATCGCAGGGC ATGAAGGACA CCTTCTGGCT ACAGAGCATG CAGGCCGGCC ACAAAGCCGC CCACGACTCG ATCAAGGCGT TCTCCGAAAC CGACCTCACC GAAGACCTCA AGCGCTTCGA CGTACCCACC CTGATCATCC ACGGCGGCGA CGACCAGGTC GTGCCAATCG AGAACTCCGC CCACGAAGCA CACGAGATCG TGGCCGACTC CACCCTCAAG GTCTACCCCG ACGGCCCCCA CGGCATCACC GACACCCACA AGCAGCAGCT CAACAACGAC CTACTCACCT TCGTCAACAG CCTCTAA
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Protein sequence | METLDTPTRS TSSSRRRLVT ALLAGVTAVG IAAGGTAIAT NSSSEAQAGA AAAAGKRSNL NEGFVTTRDG VDIFYKDWGP HDGRPVVFSH GWPLNSDSWE SQMMHLADNG YRVIAHDRRG HGQSSQTWEG NDMDHYADDL ATVITKLKLR DVTLVGFSTG GGEVARYVGR HGTDRIAQVA LVGAVTPLML KTPDNPNGVP IDVFDGLREG SLTDRSQLYR DLAEGPFFGA NRPDAEVSQG MKDTFWLQSM QAGHKAAHDS IKAFSETDLT EDLKRFDVPT LIIHGGDDQV VPIENSAHEA HEIVADSTLK VYPDGPHGIT DTHKQQLNND LLTFVNSL
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